Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 RPS4XP14-201ENST00000493072 781 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC098799.3-201ENST00000506095 438 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 CYCSP28-201ENST00000534284 321 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC009117.1-201ENST00000563948 554 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC027455.1-201ENST00000574104 594 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 RN7SL652P-201ENST00000577769 300 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC026979.4-201ENST00000606555 645 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC244517.3-201ENST00000616254 1235 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AL035461.2-201ENST00000619201 524 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC140113.4-201ENST00000622087 222 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC105105.5-201ENST00000622635 1294 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC004232.3-201ENST00000622977 525 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC000123.2-201ENST00000623124 461 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC022893.2-201ENST00000564832 3296 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 AC009951.1-201ENST00000623674 2614 ntBASIC4.4□□□□□ -1.7
CLHC1Q8NHS4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP115-201ENST00000363177 317 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 LAP3P1-201ENST00000403648 294 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AL603766.1-201ENST00000407763 664 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 OR6K4P-201ENST00000423179 955 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC007559.1-201ENST00000428736 355 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AL935212.3-201ENST00000450729 284 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 RPL36AP41-201ENST00000493820 306 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 OR5M14P-201ENST00000506803 618 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC105129.1-201ENST00000560250 297 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC091178.1-203ENST00000584586 279 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AL031320.1-201ENST00000604177 357 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 AC016769.4-201ENST00000616893 535 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 EOGT-210ENST00000615922 1931 ntBASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
CLHC1Q8NHS4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP28-201ENST00000363841 119 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RNU6-304P-201ENST00000364855 107 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SMC4P1-201ENST00000414479 527 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RPL21P91-201ENST00000429231 479 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 NRBF2P3-201ENST00000432731 865 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms