Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 CDY19P-201ENST00000411668 1613 ntBASIC7.22□□□□□ -1.25
RNF135Q8IUD6 CDY18P-201ENST00000438294 1609 ntBASIC7.22□□□□□ -1.25
RNF135Q8IUD6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.22□□□□□ -1.25
RNF135Q8IUD6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF135Q8IUD6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 AP002800.1-201ENST00000624982 2225 ntBASIC7.21□□□□□ -1.25
RNF135Q8IUD6 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
RNF135Q8IUD6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC104297.1-201ENST00000393779 870 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RN7SKP206-201ENST00000410823 293 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MTCO3P12-201ENST00000416718 547 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 COX6CP17-201ENST00000421389 185 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RAD23BP1-201ENST00000421404 1227 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AL645939.3-201ENST00000435408 225 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 HMGB3P12-201ENST00000438745 556 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 DEFA11P-201ENST00000446470 261 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MTND1P12-201ENST00000455231 147 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 SETP20-201ENST00000457046 852 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RN7SL413P-201ENST00000482700 297 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC006390.1-201ENST00000508068 283 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC010486.1-201ENST00000511793 424 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC090424.1-201ENST00000535243 736 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC007424.1-203ENST00000554613 687 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RN7SL366P-201ENST00000577957 292 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC090236.2-201ENST00000587933 1101 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AL138895.2-201ENST00000603019 178 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AL136363.1-201ENST00000605349 337 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC021106.3-201ENST00000623925 531 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC183089.2-201ENST00000637931 916 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MIR193BHG-214ENST00000641765 509 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 CCT4P2-201ENST00000233836 1548 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AL121949.2-201ENST00000403446 1548 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 AC025125.1-201ENST00000624743 1922 ntBASIC7.21□□□□□ -1.26
RNF135Q8IUD6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RNF135Q8IUD6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 AC010928.1-201ENST00000592477 1447 ntBASIC7.2□□□□□ -1.26
RNF135Q8IUD6 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF135Q8IUD6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms