Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TCEA1P3-201ENST00000443005 880 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 MOB1AP2-201ENST00000446060 614 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 XKRYP5-201ENST00000449659 483 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC005532.2-201ENST00000467154 373 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC097484.1-201ENST00000471148 389 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 MYL12BP2-201ENST00000503948 512 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC016550.1-201ENST00000505348 785 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC093765.1-201ENST00000603758 881 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 TAS2R6P-201ENST00000605022 826 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC009163.6-201ENST00000612367 342 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AL353743.4-201ENST00000422653 1547 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 RN7SKP113-201ENST00000363891 295 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 MIR105-2-201ENST00000385083 81 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL606495.1-201ENST00000422100 813 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL512661.1-201ENST00000434586 1253 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 NPM1P33-201ENST00000438918 872 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC092685.1-201ENST00000447960 1243 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 MTND2P39-201ENST00000457230 764 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC023424.1-201ENST00000496058 459 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC097173.1-201ENST00000505862 819 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 RN7SKP260-201ENST00000516907 149 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 OR4A2P-201ENST00000527276 913 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 OR5AN2P-201ENST00000534535 896 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC063949.1-201ENST00000552900 865 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 POLR2KP1-201ENST00000553226 168 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC114947.2-201ENST00000565748 2125 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC115621.1-201ENST00000604653 858 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC010857.1-201ENST00000606398 594 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 U6.48-201ENST00000618523 106 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 BX005214.3-202ENST00000619809 325 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC095038.2-201ENST00000621464 1070 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC000123.2-201ENST00000623124 461 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC010435.1-201ENST00000623353 1177 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AP000843.1-201ENST00000624880 701 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 FRG1EP-201ENST00000634469 770 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 AC106858.1-201ENST00000637497 429 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 MTND5P11-201ENST00000511037 1812 ntBASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP54Q7Z3B4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP54Q7Z3B4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms