Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR3065-201ENST00000390137 79 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 SNORA11F-201ENST00000408237 128 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 SNRPFP1-201ENST00000414761 252 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 ARAFP1-201ENST00000422172 605 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.25□□□□□ -1.57
GABPAQ06546 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.25□□□□□ -1.57
GABPAQ06546 RPL21P91-201ENST00000429231 479 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 PHBP16-201ENST00000446318 950 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.25□□□□□ -1.57
GABPAQ06546 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 RN7SL41P-201ENST00000476144 297 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AC068587.1-201ENST00000483613 781 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AC041039.1-201ENST00000485656 536 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AGGF1P3-201ENST00000493675 1213 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AC106806.2-201ENST00000509365 500 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 RFPL4AP3-201ENST00000515267 345 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.25□□□□□ -1.57
GABPAQ06546 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.25□□□□□ -1.57
GABPAQ06546 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.25□□□□□ -1.57
GABPAQ06546 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.25□□□□□ -1.57
GABPAQ06546 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.25□□□□□ -1.57
GABPAQ06546 AC021483.2-201ENST00000567415 758 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AC113403.1-201ENST00000604910 193 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 AL023881.1-201ENST00000621088 301 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 AC139769.1-204ENST00000472297 1931 ntBASIC5.25□□□□□ -1.57
GABPAQ06546 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GABPAQ06546 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GABPAQ06546 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 MIR331-201ENST00000362302 94 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 RNU1-132P-201ENST00000364300 164 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 RNA5SP366-201ENST00000365454 123 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 EI24P3-201ENST00000399046 1062 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 MIR921-201ENST00000401133 56 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 RAB9AP4-201ENST00000415230 609 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.24□□□□□ -1.57
GABPAQ06546 YY1P1-201ENST00000427625 668 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 FTLP19-201ENST00000433300 394 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 RPS3AP54-201ENST00000435535 734 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 ACTR3P2-201ENST00000439585 1257 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GABPAQ06546 AC114495.1-201ENST00000441274 436 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 RAD1P2-201ENST00000446414 663 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 CYCSP34-201ENST00000458172 304 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 FTH1P2-201ENST00000466086 412 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 STRADBP1-201ENST00000478954 1281 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 AC138701.1-201ENST00000524329 714 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.24□□□□□ -1.57
GABPAQ06546 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 OR51C1P-201ENST00000608504 942 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 uc_338.13-201ENST00000618243 179 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GABPAQ06546 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GABPAQ06546 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GABPAQ06546 AC022893.2-201ENST00000564832 3296 ntBASIC5.24□□□□□ -1.57
GABPAQ06546 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.23□□□□□ -1.57
GABPAQ06546 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.23□□□□□ -1.57
GABPAQ06546 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC092111.2-201ENST00000611627 1414 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC011933.1-201ENST00000413334 321 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.23□□□□□ -1.57
GABPAQ06546 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC116533.1-201ENST00000459748 321 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 RN7SL691P-201ENST00000494487 301 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.23□□□□□ -1.57
GABPAQ06546 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.23□□□□□ -1.57
GABPAQ06546 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.23□□□□□ -1.57
GABPAQ06546 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.23□□□□□ -1.57
GABPAQ06546 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.23□□□□□ -1.57
GABPAQ06546 BNIP3P7-201ENST00000605641 516 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 COX6CP4-201ENST00000605798 228 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 MIR8069-1-201ENST00000616627 86 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 MIR8069-2-201ENST00000621412 86 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 MIR3653-201ENST00000625572 110 ntBASIC5.23□□□□□ -1.57
GABPAQ06546 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.23□□□□□ -1.57
GABPAQ06546 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
GABPAQ06546 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GABPAQ06546 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.22□□□□□ -1.57
GABPAQ06546 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
GABPAQ06546 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.22□□□□□ -1.57
GABPAQ06546 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms