Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH4P55283 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH4P55283 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
CDH4P55283 RNA5SP360-201ENST00000516555 118 ntBASIC4.7□□□□□ -1.66
CDH4P55283 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH4P55283 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH4P55283 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH4P55283 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH4P55283 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH4P55283 AP005119.2-201ENST00000579735 1105 ntBASIC4.7□□□□□ -1.66
CDH4P55283 AC093765.1-201ENST00000603758 881 ntBASIC4.7□□□□□ -1.66
CDH4P55283 COX6CP4-201ENST00000605798 228 ntBASIC4.7□□□□□ -1.66
CDH4P55283 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH4P55283 AC006971.1-201ENST00000407916 4486 ntBASIC4.7□□□□□ -1.66
CDH4P55283 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH4P55283 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH4P55283 OR51H2P-202ENST00000641424 3046 ntBASIC4.7□□□□□ -1.66
CDH4P55283 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH4P55283 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDH4P55283 TRIM60P17-201ENST00000415181 719 ntBASIC4.69□□□□□ -1.66
CDH4P55283 AL358176.3-201ENST00000420757 454 ntBASIC4.69□□□□□ -1.66
CDH4P55283 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH4P55283 AL035551.1-201ENST00000446931 348 ntBASIC4.69□□□□□ -1.66
CDH4P55283 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 OR7L1P-201ENST00000456181 380 ntBASIC4.69□□□□□ -1.66
CDH4P55283 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH4P55283 snoU109.6-201ENST00000516831 118 ntBASIC4.69□□□□□ -1.66
CDH4P55283 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH4P55283 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH4P55283 AP000827.1-201ENST00000527814 258 ntBASIC4.69□□□□□ -1.66
CDH4P55283 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 AL049874.4-201ENST00000557593 255 ntBASIC4.69□□□□□ -1.66
CDH4P55283 AC084783.1-201ENST00000565846 910 ntBASIC4.69□□□□□ -1.66
CDH4P55283 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH4P55283 AC008782.1-201ENST00000603386 430 ntBASIC4.69□□□□□ -1.66
CDH4P55283 MIR6748-201ENST00000610433 71 ntBASIC4.69□□□□□ -1.66
CDH4P55283 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.69□□□□□ -1.66
CDH4P55283 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH4P55283 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH4P55283 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH4P55283 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 UGT2B26P-201ENST00000508672 1613 ntBASIC4.68□□□□□ -1.66
CDH4P55283 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH4P55283 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CDH4P55283 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 RNU6-386P-201ENST00000362650 107 ntBASIC4.68□□□□□ -1.66
CDH4P55283 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 SNORA56-201ENST00000383966 129 ntBASIC4.68□□□□□ -1.66
CDH4P55283 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH4P55283 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH4P55283 EIF4A1P1-201ENST00000420241 934 ntBASIC4.68□□□□□ -1.66
CDH4P55283 RPEP3-201ENST00000425462 676 ntBASIC4.68□□□□□ -1.66
CDH4P55283 CENPIP1-201ENST00000425713 902 ntBASIC4.68□□□□□ -1.66
CDH4P55283 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH4P55283 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 RPL23AP4-201ENST00000427757 463 ntBASIC4.68□□□□□ -1.66
CDH4P55283 CNOT7P1-201ENST00000429006 852 ntBASIC4.68□□□□□ -1.66
CDH4P55283 NDUFA5P1-201ENST00000433858 341 ntBASIC4.68□□□□□ -1.66
CDH4P55283 MTND2P2-201ENST00000434633 945 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 RPL23AP93-201ENST00000440847 484 ntBASIC4.68□□□□□ -1.66
CDH4P55283 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.68□□□□□ -1.66
CDH4P55283 TXNP2-201ENST00000443918 295 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 RPL10P17-201ENST00000453852 316 ntBASIC4.68□□□□□ -1.66
CDH4P55283 snoU13.1-201ENST00000459157 104 ntBASIC4.68□□□□□ -1.66
CDH4P55283 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH4P55283 AC006463.2-201ENST00000473326 348 ntBASIC4.68□□□□□ -1.66
CDH4P55283 LARP7P4-201ENST00000481075 878 ntBASIC4.68□□□□□ -1.66
CDH4P55283 RN7SL459P-201ENST00000481078 302 ntBASIC4.68□□□□□ -1.66
CDH4P55283 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH4P55283 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH4P55283 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH4P55283 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms