Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 BNIP3P32-201ENST00000600015 554 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 AC112503.1-201ENST00000608436 391 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 RPL23AP61-201ENST00000623642 466 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.94□□□□□ -1.62
CLCNKAP51800 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.94□□□□□ -1.62
CLCNKAP51800 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCNKAP51800 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.94□□□□□ -1.62
CLCNKAP51800 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.93□□□□□ -1.62
CLCNKAP51800 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLCNKAP51800 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 SNORA51.8-201ENST00000384234 132 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 SNORA77-201ENST00000408716 125 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 COX5BP7-201ENST00000414780 274 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.93□□□□□ -1.62
CLCNKAP51800 OR13Z1P-201ENST00000416141 834 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 RPA2P2-201ENST00000419698 796 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 MTCO2P17-201ENST00000424336 677 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AL590762.4-201ENST00000425885 253 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AC004854.1-201ENST00000440356 349 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC073648.4-201ENST00000442655 781 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 RPL31P44-201ENST00000447680 377 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 TCEA1P1-201ENST00000449716 880 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC104982.1-201ENST00000478775 574 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.93□□□□□ -1.62
CLCNKAP51800 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC104229.1-201ENST00000561364 255 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC011492.1-201ENST00000600023 315 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AC021851.1-201ENST00000608537 1082 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 AP001521.2-201ENST00000608772 546 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC084824.4-201ENST00000620106 731 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLCNKAP51800 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLCNKAP51800 AC093591.2-201ENST00000565254 3843 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 BX005019.1-201ENST00000561881 1810 ntBASIC4.93□□□□□ -1.62
CLCNKAP51800 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLCNKAP51800 AC106754.1-201ENST00000562632 1513 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 PCAT14-202ENST00000627127 3935 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.92□□□□□ -1.62
CLCNKAP51800 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLCNKAP51800 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLCNKAP51800 RN7SKP224-201ENST00000364140 325 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 SNORA70.10-201ENST00000384515 134 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AL021331.1-201ENST00000402817 582 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 RNU2-50P-201ENST00000410494 143 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.92□□□□□ -1.62
CLCNKAP51800 CHEK2P3-201ENST00000416118 248 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 RBMY2KP-201ENST00000418221 992 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 OR6C64P-201ENST00000419708 825 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AC114973.1-201ENST00000429057 632 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 MTND2P2-201ENST00000434633 945 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AC093716.1-201ENST00000435923 377 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 Z80107.1-201ENST00000436830 412 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.92□□□□□ -1.62
CLCNKAP51800 AL137845.2-201ENST00000444292 988 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 PRPF38AP1-201ENST00000451976 933 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 RPL21P18-201ENST00000469899 480 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 RPL7P16-201ENST00000479738 738 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.92□□□□□ -1.62
CLCNKAP51800 NIFKP7-201ENST00000503365 834 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLCNKAP51800 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.92□□□□□ -1.62
CLCNKAP51800 AC133963.2-201ENST00000513686 578 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 MTCYBP19-201ENST00000517463 1124 ntBASIC4.92□□□□□ -1.62
CLCNKAP51800 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms