Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNF2P1-201ENST00000442955 1010 ntBASIC4.29□□□□□ -1.72
CDX1P47902 ELOCP16-201ENST00000444494 332 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 RPL7AP28-201ENST00000464513 571 ntBASIC4.29□□□□□ -1.72
CDX1P47902 RPL21P18-201ENST00000469899 480 ntBASIC4.29□□□□□ -1.72
CDX1P47902 OR52A4P-201ENST00000472867 958 ntBASIC4.29□□□□□ -1.72
CDX1P47902 RN7SL177P-201ENST00000476596 299 ntBASIC4.29□□□□□ -1.72
CDX1P47902 RPS4XP14-201ENST00000493072 781 ntBASIC4.29□□□□□ -1.72
CDX1P47902 RN7SL447P-201ENST00000494711 245 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.29□□□□□ -1.72
CDX1P47902 RN7SKP253-201ENST00000516424 309 ntBASIC4.29□□□□□ -1.72
CDX1P47902 IGLV2-28-201ENST00000520681 304 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC008562.1-201ENST00000521763 330 ntBASIC4.29□□□□□ -1.72
CDX1P47902 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 MIR4489-201ENST00000578869 62 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC126365.2-201ENST00000580630 379 ntBASIC4.29□□□□□ -1.72
CDX1P47902 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.29□□□□□ -1.72
CDX1P47902 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 AC133794.1-201ENST00000602731 914 ntBASIC4.29□□□□□ -1.72
CDX1P47902 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC005840.5-201ENST00000619166 599 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AP000648.2-201ENST00000624182 404 ntBASIC4.29□□□□□ -1.72
CDX1P47902 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 AC119744.1-201ENST00000454746 1715 ntBASIC4.29□□□□□ -1.72
CDX1P47902 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.29□□□□□ -1.72
CDX1P47902 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 AC073055.1-201ENST00000456901 1621 ntBASIC4.28□□□□□ -1.72
CDX1P47902 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDX1P47902 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 AL592182.3-201ENST00000642132 3304 ntBASIC4.28□□□□□ -1.72
CDX1P47902 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDX1P47902 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 RNA5SP234-201ENST00000363916 119 ntBASIC4.28□□□□□ -1.72
CDX1P47902 RNA5SP223-201ENST00000365174 120 ntBASIC4.28□□□□□ -1.72
CDX1P47902 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDX1P47902 SNORD65C-201ENST00000390962 71 ntBASIC4.28□□□□□ -1.72
CDX1P47902 MIR1286-201ENST00000408112 78 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 AC114814.2-201ENST00000419195 485 ntBASIC4.28□□□□□ -1.72
CDX1P47902 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 RIMKLBP2-201ENST00000424737 654 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 CYCSP12-201ENST00000437729 300 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.28□□□□□ -1.72
CDX1P47902 UBE2V1P5-201ENST00000440070 405 ntBASIC4.28□□□□□ -1.72
CDX1P47902 RPL7P33-201ENST00000444159 742 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AL163193.1-201ENST00000444895 788 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AC105399.1-202ENST00000447303 205 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AL606490.1-201ENST00000452266 765 ntBASIC4.28□□□□□ -1.72
CDX1P47902 DNAJC19P8-201ENST00000452887 259 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AC010683.1-201ENST00000473673 378 ntBASIC4.28□□□□□ -1.72
CDX1P47902 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.28□□□□□ -1.72
CDX1P47902 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDX1P47902 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.28□□□□□ -1.72
CDX1P47902 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 AC010735.1-201ENST00000567305 1026 ntBASIC4.28□□□□□ -1.72
CDX1P47902 FKBP1AP1-201ENST00000594588 318 ntBASIC4.28□□□□□ -1.72
CDX1P47902 BNIP3P27-201ENST00000599991 412 ntBASIC4.28□□□□□ -1.72
CDX1P47902 IMMP1LP3-201ENST00000604197 224 ntBASIC4.28□□□□□ -1.72
CDX1P47902 TAS2R6P-201ENST00000605022 826 ntBASIC4.28□□□□□ -1.72
CDX1P47902 MIR8069-1-201ENST00000616627 86 ntBASIC4.28□□□□□ -1.72
CDX1P47902 MIR8069-2-201ENST00000621412 86 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AP003072.4-201ENST00000624580 310 ntBASIC4.28□□□□□ -1.72
CDX1P47902 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.28□□□□□ -1.72
CDX1P47902 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
CDX1P47902 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.28□□□□□ -1.73
CDX1P47902 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.27□□□□□ -1.73
CDX1P47902 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms