Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNA5SP303-201ENST00000516192 130 ntBASIC4.52□□□□□ -1.69
RORAP35398 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.52□□□□□ -1.69
RORAP35398 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.52□□□□□ -1.69
RORAP35398 AC084033.1-201ENST00000550830 633 ntBASIC4.52□□□□□ -1.69
RORAP35398 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
RORAP35398 GMCL1P2-201ENST00000605230 823 ntBASIC4.52□□□□□ -1.69
RORAP35398 AC097505.1-201ENST00000610199 565 ntBASIC4.52□□□□□ -1.69
RORAP35398 AL356274.1-201ENST00000617064 410 ntBASIC4.52□□□□□ -1.69
RORAP35398 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.52□□□□□ -1.69
RORAP35398 AC015914.2-201ENST00000618167 288 ntBASIC4.52□□□□□ -1.69
RORAP35398 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RORAP35398 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RORAP35398 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RORAP35398 VN2R3P-201ENST00000422626 1412 ntBASIC4.52□□□□□ -1.69
RORAP35398 AC009643.2-201ENST00000603543 1448 ntBASIC4.52□□□□□ -1.69
RORAP35398 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RORAP35398 AC090017.1-201ENST00000548612 1779 ntBASIC4.52□□□□□ -1.69
RORAP35398 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RORAP35398 DDX18P5-201ENST00000534547 1306 ntBASIC4.51□□□□□ -1.69
RORAP35398 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
RORAP35398 AL451142.2-201ENST00000429076 2090 ntBASIC4.51□□□□□ -1.69
RORAP35398 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RORAP35398 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.51□□□□□ -1.69
RORAP35398 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.51□□□□□ -1.69
RORAP35398 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 VN1R37P-201ENST00000419096 748 ntBASIC4.51□□□□□ -1.69
RORAP35398 GLUD1P9-201ENST00000420997 1173 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC068287.1-201ENST00000430283 295 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.51□□□□□ -1.69
RORAP35398 CYCSP42-201ENST00000450823 238 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.51□□□□□ -1.69
RORAP35398 CYCSP34-201ENST00000458172 304 ntBASIC4.51□□□□□ -1.69
RORAP35398 RPL7AP28-201ENST00000464513 571 ntBASIC4.51□□□□□ -1.69
RORAP35398 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
RORAP35398 RNU6-709P-201ENST00000517257 104 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
RORAP35398 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AC105129.1-201ENST00000560250 297 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
RORAP35398 AL023583.1-201ENST00000607518 1143 ntBASIC4.51□□□□□ -1.69
RORAP35398 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.51□□□□□ -1.69
RORAP35398 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RORAP35398 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RORAP35398 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RORAP35398 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RORAP35398 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
RORAP35398 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.5□□□□□ -1.69
RORAP35398 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RORAP35398 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RORAP35398 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 OR51C1P-202ENST00000641159 1444 ntBASIC4.5□□□□□ -1.69
RORAP35398 RNU1-94P-201ENST00000362627 173 ntBASIC4.5□□□□□ -1.69
RORAP35398 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.5□□□□□ -1.69
RORAP35398 SNORD113.2-201ENST00000364166 89 ntBASIC4.5□□□□□ -1.69
RORAP35398 RNA5SP397-201ENST00000391323 118 ntBASIC4.5□□□□□ -1.69
RORAP35398 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RORAP35398 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.5□□□□□ -1.69
RORAP35398 ATG4AP1-201ENST00000416893 538 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC004690.1-201ENST00000418216 328 ntBASIC4.5□□□□□ -1.69
RORAP35398 RPS27AP7-201ENST00000422792 455 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC093084.1-201ENST00000424233 687 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.5□□□□□ -1.69
RORAP35398 BTF3P6-201ENST00000448054 499 ntBASIC4.5□□□□□ -1.69
RORAP35398 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.5□□□□□ -1.69
RORAP35398 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.5□□□□□ -1.69
RORAP35398 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.5□□□□□ -1.69
RORAP35398 RN7SKP92-201ENST00000517266 244 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.5□□□□□ -1.69
RORAP35398 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
RORAP35398 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.5□□□□□ -1.69
RORAP35398 AC068446.3-201ENST00000555285 382 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms