Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC8P31273 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXC8P31273 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC8P31273 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC8P31273 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC8P31273 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC8P31273 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
HOXC8P31273 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC8P31273 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXC8P31273 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.21□□□□□ -1.57
HOXC8P31273 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 AC009501.3-201ENST00000605001 1352 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 GVINP1-202ENST00000531871 7271 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 RNU6-225P-201ENST00000384613 103 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC8P31273 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC8P31273 MRPL35P2-201ENST00000448009 511 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 CDH12P2-201ENST00000504393 298 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 OR8K2P-201ENST00000524645 927 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 OR8G5-201ENST00000524943 1041 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AP001781.1-201ENST00000530977 207 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC8P31273 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 PARP1P2-201ENST00000556806 195 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 ATP5J2P6-201ENST00000565203 266 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 DPRXP4-201ENST00000578053 568 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 AC005962.2-201ENST00000611427 652 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AC006338.2-201ENST00000616864 791 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 AC068831.8-201ENST00000620171 435 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HOXC8P31273 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC8P31273 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC8P31273 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 SAMMSON-213ENST00000641336 1521 ntBASIC5.21□□□□□ -1.58
HOXC8P31273 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC8P31273 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HOXC8P31273 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC8P31273 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC8P31273 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 RAD17P1-201ENST00000418130 2042 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXC8P31273 Y_RNA.110-201ENST00000363220 99 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 RPL21P67-201ENST00000402896 478 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 ARL4AP5-201ENST00000404372 599 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 RANP4-201ENST00000413361 655 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AC013410.2-201ENST00000422627 201 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AL390879.2-203ENST00000426943 1121 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 VDAC1P6-201ENST00000430062 855 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC8P31273 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC8P31273 ZFAND6P1-201ENST00000434138 605 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 RPL12P18-201ENST00000437175 325 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 MTND4P15-201ENST00000437913 1033 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC8P31273 CASP3P1-201ENST00000446037 609 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 H2AFZP5-201ENST00000446960 382 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC8P31273 MTND5P8-201ENST00000449817 1083 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 NPM1P39-201ENST00000449818 867 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC8P31273 Z95152.1-201ENST00000453556 656 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AL354710.1-201ENST00000453641 246 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 PSMC1P13-201ENST00000458195 985 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 AC068587.1-201ENST00000483613 781 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC8P31273 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.2□□□□□ -1.58
HOXC8P31273 SUMO1P1-201ENST00000497904 306 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms