Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 AL445665.1-202ENST00000452436 324 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 RNU6-956P-201ENST00000458868 103 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC006511.1-201ENST00000470614 315 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 ARL4AP1-201ENST00000503220 705 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 HMGB1P28-201ENST00000507778 552 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 MTCYBP43-201ENST00000513621 740 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.01□□□□□ -1.29
ERCC3P19447 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC112191.2-201ENST00000522428 333 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 AP000648.1-201ENST00000529682 397 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 SNORD95-201ENST00000579879 68 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 MIR4776-2-201ENST00000580204 80 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC233702.7-202ENST00000582941 211 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.01□□□□□ -1.29
ERCC3P19447 DEFB131E-202ENST00000602581 683 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC091193.1-201ENST00000604640 448 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 RNA5SP440-201ENST00000612665 119 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 RN7SL787P-201ENST00000613000 284 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 AL357562.1-201ENST00000624911 609 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 CASC19-204ENST00000641001 2055 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
ERCC3P19447 NLRP3P1-201ENST00000622303 1785 ntBASIC7□□□□□ -1.29
ERCC3P19447 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7□□□□□ -1.29
ERCC3P19447 RNU5F-7P-201ENST00000363696 115 ntBASIC7□□□□□ -1.29
ERCC3P19447 RNU6-374P-201ENST00000364146 108 ntBASIC7□□□□□ -1.29
ERCC3P19447 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 Y_RNA.553-201ENST00000384670 102 ntBASIC7□□□□□ -1.29
ERCC3P19447 RN7SKP286-201ENST00000410894 299 ntBASIC7□□□□□ -1.29
ERCC3P19447 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 MTCO1P21-201ENST00000416634 589 ntBASIC7□□□□□ -1.29
ERCC3P19447 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 RPL37P1-201ENST00000432310 284 ntBASIC7□□□□□ -1.29
ERCC3P19447 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 ACTR3P2-201ENST00000439585 1257 ntBASIC7□□□□□ -1.29
ERCC3P19447 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7□□□□□ -1.29
ERCC3P19447 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7□□□□□ -1.29
ERCC3P19447 AC064862.4-201ENST00000442180 334 ntBASIC7□□□□□ -1.29
ERCC3P19447 VN1R32P-201ENST00000452234 905 ntBASIC7□□□□□ -1.29
ERCC3P19447 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 RN7SL269P-201ENST00000467795 305 ntBASIC7□□□□□ -1.29
ERCC3P19447 RPL7P38-201ENST00000488396 739 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7□□□□□ -1.29
ERCC3P19447 AC025674.1-201ENST00000507074 324 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 AC060788.1-201ENST00000521318 469 ntBASIC7□□□□□ -1.29
ERCC3P19447 SLC2A13P1-201ENST00000531560 322 ntBASIC7□□□□□ -1.29
ERCC3P19447 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7□□□□□ -1.29
ERCC3P19447 AL391156.1-201ENST00000554965 554 ntBASIC7□□□□□ -1.29
ERCC3P19447 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 AC017100.2-201ENST00000584628 355 ntBASIC7□□□□□ -1.29
ERCC3P19447 COX6CP7-201ENST00000597056 208 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC008687.2-201ENST00000597865 520 ntBASIC7□□□□□ -1.29
ERCC3P19447 AL031775.1-201ENST00000607014 887 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC116651.1-201ENST00000609724 556 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC079228.1-201ENST00000624774 1049 ntBASIC7□□□□□ -1.29
ERCC3P19447 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 AL392088.2-201ENST00000637607 285 ntBASIC7□□□□□ -1.29
ERCC3P19447 AC232271.1-201ENST00000602455 2715 ntBASIC7□□□□□ -1.29
ERCC3P19447 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7□□□□□ -1.29
ERCC3P19447 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
ERCC3P19447 RBPJP7-201ENST00000442803 1447 ntBASIC7□□□□□ -1.29
ERCC3P19447 RBPJP5-201ENST00000449433 1447 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms