Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.87□□□□□ -1.31
LIG1P18858 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG1P18858 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG1P18858 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG1P18858 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG1P18858 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG1P18858 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LIG1P18858 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG1P18858 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG1P18858 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG1P18858 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG1P18858 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.86□□□□□ -1.31
LIG1P18858 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 AC117409.1-201ENST00000470499 1310 ntBASIC6.86□□□□□ -1.31
LIG1P18858 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LIG1P18858 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 RN7SKP108-201ENST00000411367 328 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 RNGTTP1-201ENST00000420965 728 ntBASIC6.86□□□□□ -1.31
LIG1P18858 RPS15AP30-201ENST00000420976 390 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC004448.2-201ENST00000422360 586 ntBASIC6.86□□□□□ -1.31
LIG1P18858 FO393419.3-201ENST00000428741 282 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.86□□□□□ -1.31
LIG1P18858 MTCO1P3-201ENST00000429327 192 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC002069.1-201ENST00000429649 1159 ntBASIC6.86□□□□□ -1.31
LIG1P18858 GAPDHP34-201ENST00000432112 823 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AL138787.1-202ENST00000437804 898 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC093155.1-201ENST00000440164 826 ntBASIC6.86□□□□□ -1.31
LIG1P18858 PCNPP2-201ENST00000441651 455 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.86□□□□□ -1.31
LIG1P18858 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 AP002884.1-201ENST00000479691 655 ntBASIC6.86□□□□□ -1.31
LIG1P18858 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 AC091874.2-201ENST00000505889 720 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 KRT19P6-201ENST00000510983 209 ntBASIC6.86□□□□□ -1.31
LIG1P18858 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 SNORA70.11-201ENST00000515987 138 ntBASIC6.86□□□□□ -1.31
LIG1P18858 SNORA70.13-201ENST00000516116 138 ntBASIC6.86□□□□□ -1.31
LIG1P18858 snoU109.5-201ENST00000516231 132 ntBASIC6.86□□□□□ -1.31
LIG1P18858 RN7SKP244-201ENST00000516513 307 ntBASIC6.86□□□□□ -1.31
LIG1P18858 RNA5SP434-201ENST00000516647 121 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 AC006512.2-201ENST00000543250 486 ntBASIC6.86□□□□□ -1.31
LIG1P18858 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 AC107958.1-201ENST00000556576 290 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.86□□□□□ -1.31
LIG1P18858 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 SNORA59B-202ENST00000578183 701 ntBASIC6.86□□□□□ -1.31
LIG1P18858 SNORD39.2-201ENST00000579995 76 ntBASIC6.86□□□□□ -1.31
LIG1P18858 MIR4271-201ENST00000582451 67 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 AC010487.1-201ENST00000594408 1172 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC025857.2-201ENST00000602711 238 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC069545.1-201ENST00000605671 358 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 AC079395.2-201ENST00000610982 737 ntBASIC6.86□□□□□ -1.31
LIG1P18858 MIR7844-201ENST00000616161 122 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AL355974.3-201ENST00000617383 467 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC024023.1-201ENST00000624530 922 ntBASIC6.86□□□□□ -1.31
LIG1P18858 SNX18P12-201ENST00000624821 759 ntBASIC6.86□□□□□ -1.31
LIG1P18858 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
LIG1P18858 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
LIG1P18858 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
LIG1P18858 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG1P18858 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 MTND4P23-201ENST00000447723 1363 ntBASIC6.85□□□□□ -1.31
LIG1P18858 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LIG1P18858 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms