Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL359715.4-201ENST00000606629 1436 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDGFRAP16234 RNU6-666P-201ENST00000363499 107 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 MIR320B1-201ENST00000390209 79 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AC093719.1-202ENST00000392735 373 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 U3.35-201ENST00000408405 208 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 EIF4A1P3-201ENST00000411521 244 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 CASP3P1-201ENST00000446037 609 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AC010733.1-201ENST00000451515 401 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AURKAPS2-201ENST00000454983 333 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFRAP16234 OR7H2P-201ENST00000513483 306 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFRAP16234 OR8K2P-201ENST00000524645 927 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC133555.2-201ENST00000550213 292 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.03□□□□□ -1.6
PDGFRAP16234 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 AC012557.1-201ENST00000607115 611 ntBASIC5.03□□□□□ -1.6
PDGFRAP16234 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.03□□□□□ -1.6
PDGFRAP16234 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDGFRAP16234 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.03□□□□□ -1.6
PDGFRAP16234 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 NCLP2-201ENST00000416078 1462 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 U3.30-201ENST00000391308 210 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 AL356057.1-202ENST00000402263 756 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AL645608.4-201ENST00000423619 154 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 MTATP6P11-201ENST00000428071 670 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 ARL4AP4-201ENST00000434170 518 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC092447.2-201ENST00000435487 669 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 MTND4P15-201ENST00000437913 1033 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.02□□□□□ -1.61
PDGFRAP16234 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 CCDC75P1-201ENST00000469247 791 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 RPS23P1-201ENST00000491662 432 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AF186190.1-201ENST00000517470 480 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 BUD31P1-201ENST00000521828 359 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 FKBP1BP1-201ENST00000553366 325 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AL049870.4-201ENST00000555741 486 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 MIR3936-201ENST00000584304 110 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 AL049844.2-201ENST00000604280 628 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 FAM27B-201ENST00000610601 213 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC009704.2-201ENST00000618739 483 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PDGFRAP16234 HSPD1P11-201ENST00000508643 1702 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms