Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RN7SKP115-201ENST00000363177 317 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL589647.1-201ENST00000402485 466 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL078604.1-201ENST00000404609 466 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RN7SKP206-201ENST00000410823 293 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RPS20P25-201ENST00000412447 352 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC079355.1-201ENST00000421770 223 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL391219.1-201ENST00000422570 483 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 MTCO1P57-201ENST00000432182 261 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 GSTA7P-201ENST00000438425 448 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 OR7E125P-201ENST00000443450 846 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 HMGB1P16-201ENST00000447155 540 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 VN1R48P-201ENST00000448149 1036 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 FAR2P1-206ENST00000449736 709 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RPS26P41-201ENST00000450370 284 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SCARNA10-201ENST00000459255 330 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RPS26P39-201ENST00000469206 341 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RPS18P6-201ENST00000476880 458 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC116562.1-201ENST00000485355 781 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RPS26P15-201ENST00000488067 348 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC025164.1-201ENST00000496249 478 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC015864.1-201ENST00000496512 544 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RNU6-491P-201ENST00000516099 110 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 BUD31P1-201ENST00000521828 359 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC126177.5-201ENST00000549599 178 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 BX322635.1-201ENST00000605804 496 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC026368.1-201ENST00000614934 690 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AC091905.2-201ENST00000623143 306 ntBASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1P01909 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RN7SKP162-201ENST00000363605 345 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 MIR708-201ENST00000390708 88 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AL357515.1-201ENST00000402967 542 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 ZNF603P-201ENST00000405613 487 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AMZ2P2-201ENST00000406819 1057 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RNA5SP345-201ENST00000410646 108 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RN7SKP167-201ENST00000411047 285 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RPS23P10-201ENST00000416185 486 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC093655.2-201ENST00000425735 631 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RNF19BPX-201ENST00000426224 625 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 PRELID3BP10-201ENST00000431957 584 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC007563.3-201ENST00000433233 371 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RPS17P8-201ENST00000434525 335 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 MTCYBP29-201ENST00000436327 1006 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 RPL5P13-201ENST00000462840 709 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 HIGD1AP14-201ENST00000507617 282 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 IGKV2-18-201ENST00000522607 343 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 OR4V1P-201ENST00000525394 1140 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 OR10G5P-201ENST00000532733 358 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms