Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC015908.5-201ENST00000623289 343 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 AL442639.1-201ENST00000625030 1899 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFBP01127 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
PDGFBP01127 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFBP01127 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 AC009229.4-201ENST00000623854 1947 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFBP01127 OR4K17-201ENST00000315543 1032 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDGFBP01127 RPL23AP59-201ENST00000399415 461 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 RN7SKP222-201ENST00000410651 315 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 AL590609.2-201ENST00000421430 368 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 ARL4AP4-201ENST00000434170 518 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AC090018.1-201ENST00000434369 367 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AL353597.2-202ENST00000434901 373 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 FTH1P16-201ENST00000435241 552 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AL358232.1-201ENST00000448030 501 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AL162591.2-201ENST00000449634 317 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFBP01127 RPL21P126-201ENST00000470049 478 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFBP01127 AC016550.3-201ENST00000515706 767 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 BUD31P1-201ENST00000521828 359 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFBP01127 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 AC115286.1-201ENST00000604298 434 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AL356863.1-201ENST00000623378 1080 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFBP01127 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 A2MP1-204ENST00000566278 4130 ntBASIC4.88□□□□□ -1.63
PDGFBP01127 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PDGFBP01127 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFBP01127 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFBP01127 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
PDGFBP01127 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PDGFBP01127 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFBP01127 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 RNU1-13P-201ENST00000384499 162 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 RPS26P8-201ENST00000393490 348 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 ATP5F1P2-201ENST00000398143 760 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 RPL6P29-201ENST00000414863 865 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 TRGV6-201ENST00000417928 299 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 MTCO3P21-201ENST00000430791 643 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFBP01127 AL353898.1-201ENST00000444055 238 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 MTND3P4-201ENST00000453537 303 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 PSMC1P13-201ENST00000458195 985 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC073073.1-201ENST00000493920 463 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFBP01127 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 RNU6-362P-201ENST00000516736 90 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFBP01127 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFBP01127 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFBP01127 AC245128.3-201ENST00000594721 748 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC090948.1-201ENST00000607464 549 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC010424.2-201ENST00000607594 443 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC012409.3-201ENST00000611343 981 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 AC004076.2-201ENST00000620532 3323 ntBASIC4.87□□□□□ -1.63
PDGFBP01127 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFBP01127 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFBP01127 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms