Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 AC020978.8-201ENST00000571975 3022 ntBASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 LINC02035-201ENST00000610128 5476 ntBASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TMEM88BA6NKF7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RNU6-251P-201ENST00000363235 104 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RNA5SP500-201ENST00000364486 119 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RNU1-46P-201ENST00000384425 164 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 Y_RNA.598-201ENST00000410480 95 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 USP9YP18-201ENST00000425912 695 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 SNRPEP7-201ENST00000438350 220 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC022431.1-201ENST00000450941 438 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RN7SL172P-201ENST00000460535 303 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL672167.3-201ENST00000465951 960 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 FAM172BP-201ENST00000487497 1089 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC093267.1-201ENST00000489176 961 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 FCF1P3-201ENST00000496394 590 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC116353.2-201ENST00000505332 712 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RNU6-314P-201ENST00000516574 104 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RN7SKP66-201ENST00000516681 231 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AL159169.3-201ENST00000608871 561 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 AC103710.1-201ENST00000610003 901 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RN7SL544P-201ENST00000617232 284 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 RN7SL763P-201ENST00000620922 284 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 SMG1P7-201ENST00000565246 2704 ntBASIC7.2□□□□□ -1.26
TMEM88BA6NKF7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 RN7SKP128-201ENST00000364270 303 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 OR6E1P-201ENST00000414424 923 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 ZYG11AP1-201ENST00000430329 837 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 PPIAP13-201ENST00000434706 478 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 VN1R10P-201ENST00000447106 875 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 RPS23P9-201ENST00000448848 438 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC098824.1-201ENST00000453565 980 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC097493.1-201ENST00000463958 372 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 IGKV1D-22-201ENST00000518953 324 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 MED28P5-201ENST00000528254 438 ntBASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.19□□□□□ -1.26
TMEM88BA6NKF7 IGBP1P1-201ENST00000554337 1009 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms