Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM235A6NFC5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 COX6B1P1-201ENST00000415962 213 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AL391219.1-201ENST00000422570 483 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AP001324.1-201ENST00000428553 399 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 YWHAZP2-201ENST00000440317 728 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 PPIAP20-201ENST00000449839 135 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC016724.1-201ENST00000453215 421 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 RN7SL585P-201ENST00000470538 280 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC105918.1-201ENST00000474399 838 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 RN7SL205P-201ENST00000490174 284 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC110775.1-201ENST00000513721 462 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AL352979.3-201ENST00000553515 247 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC009117.1-201ENST00000563948 554 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 MIR4489-201ENST00000578869 62 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 MIR3176-201ENST00000582210 90 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC008536.1-201ENST00000602872 669 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 SUMO2P15-201ENST00000604285 278 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC015813.6-201ENST00000624409 5808 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.7□□□□□ -1.82
TMEM235A6NFC5 AC097504.1-201ENST00000515103 2415 ntBASIC3.7□□□□□ -1.82
TMEM235A6NFC5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MAPK10-253ENST00000641010 4072 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MTHFD2P5-201ENST00000320415 844 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 RN7SKP213-201ENST00000410746 298 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 RN7SKP206-201ENST00000410823 293 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 RNA5SP306-201ENST00000411087 107 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 JKAMPP1-201ENST00000413804 919 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AL355433.1-201ENST00000422804 300 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 RBMY1KP-201ENST00000423480 476 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 SUMO2P1-206ENST00000445436 284 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 PTMAP3-201ENST00000447474 330 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC008410.1-201ENST00000483777 339 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC146944.2-203ENST00000502493 354 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC006499.3-201ENST00000506077 748 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC139495.1-202ENST00000513164 354 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 NDUFB4P12-201ENST00000513465 390 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC005000.1-201ENST00000536192 288 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AL137072.1-201ENST00000603444 466 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MIR6768-201ENST00000610734 72 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC015922.4-201ENST00000612568 690 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MIR6891-201ENST00000618788 93 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC233309.1-201ENST00000619522 751 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC087385.3-201ENST00000620477 187 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC103858.2-201ENST00000621471 543 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC138907.10-201ENST00000623708 983 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC008785.1-201ENST00000624475 456 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC011503.2-201ENST00000594230 1500 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 AC010928.1-201ENST00000592477 1447 ntBASIC3.69□□□□□ -1.82
TMEM235A6NFC5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TMEM235A6NFC5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms