Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNA5SP305-201ENST00000362665 119 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 CHMP1B2P-201ENST00000399581 597 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 RNU4-34P-201ENST00000410431 124 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 RNA5SP498-201ENST00000411342 120 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AL450992.3-201ENST00000413192 568 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 BX510359.3-201ENST00000422168 306 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AJ239321.1-201ENST00000424255 564 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 NPM1P24-201ENST00000428039 894 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC004938.1-201ENST00000438468 308 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 OTX2P1-201ENST00000450956 354 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 OR7L1P-201ENST00000456181 380 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 RNU7-27P-201ENST00000459281 62 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SL558P-201ENST00000497468 299 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 ARL4AP1-201ENST00000503220 705 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC209154.1-201ENST00000582156 337 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 NPM1P45-201ENST00000583151 559 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC011453.2-201ENST00000603737 729 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC138473.1-201ENST00000605717 526 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AP001521.2-201ENST00000608772 546 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AC016957.2-201ENST00000616998 848 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 AL139811.1-201ENST00000424779 2299 ntBASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
RHBDD3Q9Y3P4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 RARSP1-201ENST00000542842 1418 ntBASIC4.15□□□□□ -1.74
RHBDD3Q9Y3P4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SKP95-201ENST00000362860 303 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RNA5SP507-201ENST00000363603 121 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-532P-201ENST00000384318 107 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RPS24P12-201ENST00000402084 394 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RPL31P52-201ENST00000407532 367 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 CASKP1-201ENST00000412870 582 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 CHEK2P3-201ENST00000416118 248 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AL138785.1-201ENST00000425821 331 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC093414.1-201ENST00000434712 514 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AL451139.1-201ENST00000434718 346 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 RPS4XP18-201ENST00000495480 763 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 ACTR6P1-201ENST00000514311 1104 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC034244.2-201ENST00000514668 858 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 DEFB109D-201ENST00000529497 240 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC093249.4-201ENST00000564755 259 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC015912.2-201ENST00000571053 181 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 ABI1P1-201ENST00000603375 1120 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC087763.1-201ENST00000603391 286 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AL121932.1-201ENST00000605542 214 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 AC005021.1-201ENST00000608730 355 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 OR6R2P-201ENST00000609216 300 ntBASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.15□□□□□ -1.75
RHBDD3Q9Y3P4 uc_338.9-201ENST00000617424 182 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms