Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-538P-201ENST00000622329 107 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 AC138907.10-201ENST00000623708 983 ntBASIC5.39□□□□□ -1.55
USP29Q9HBJ7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
USP29Q9HBJ7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AP005432.1-201ENST00000580891 3485 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RNA5SP305-201ENST00000362665 119 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 MIR513B-201ENST00000385136 84 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RNU6-932P-201ENST00000391108 106 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 UBE2V1P11-201ENST00000411559 285 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RPL22P18-201ENST00000417197 377 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC093655.2-201ENST00000425735 631 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 HSPE1P16-201ENST00000426640 348 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RPL7P34-201ENST00000433316 712 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 VN1R54P-201ENST00000435210 1049 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 MTCYBP12-201ENST00000440559 1134 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CR769776.1-201ENST00000441254 787 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AURKAPS1-201ENST00000451805 1212 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CALM1P2-201ENST00000452941 448 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 GTF2IP12-201ENST00000456547 356 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RPL7P6-201ENST00000480903 738 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 NIFKP7-201ENST00000503365 834 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AP000676.2-201ENST00000529711 301 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 OR5D15P-201ENST00000531671 942 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AC009097.3-201ENST00000563557 1018 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RPL10P14-201ENST00000565265 298 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RN7SL708P-201ENST00000580952 299 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AL136295.6-201ENST00000610486 658 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 PART1_2.1-201ENST00000612397 250 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 OR55B1P-203ENST00000641518 2602 ntBASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USP29Q9HBJ7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC015813.6-201ENST00000624409 5808 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RNA5SP443-201ENST00000363083 132 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 U8.4-201ENST00000363626 134 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RNU1-74P-201ENST00000384108 171 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 U6.112-201ENST00000384129 70 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AL645733.1-201ENST00000402250 217 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 MTCO2P31-201ENST00000402702 684 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RPL21P67-201ENST00000402896 478 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RN7SKP16-201ENST00000410180 299 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms