Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 NSRP1P1-201ENST00000444067 1693 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 MTND4P29-201ENST00000503122 1372 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 Y_RNA.390-201ENST00000383932 102 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 BTF3P7-201ENST00000407097 488 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC013404.1-201ENST00000413068 249 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RPS7P13-201ENST00000413955 498 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RPL23AP39-201ENST00000415533 405 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 REREP1Y-201ENST00000422655 198 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 HSPE1P16-201ENST00000426640 348 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 REREP2Y-201ENST00000439103 200 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AP002453.1-201ENST00000492327 668 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 OR4G11P-201ENST00000492842 939 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC116347.2-201ENST00000514912 523 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RNA5SP206-201ENST00000516703 121 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 BGLT3-201ENST00000564523 994 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 RNU4ATAC-201ENST00000580972 127 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC060780.2-201ENST00000589047 198 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC119403.2-201ENST00000590960 598 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC119501.1-201ENST00000603646 475 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC008555.7-201ENST00000605008 583 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC112220.3-201ENST00000605502 502 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL591167.1-201ENST00000607321 456 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC019131.2-201ENST00000609071 870 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC106028.5-201ENST00000610332 395 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC104985.2-201ENST00000620598 500 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL356321.1-201ENST00000621360 228 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC007342.8-201ENST00000623278 678 ntBASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 RN7SKP275-201ENST00000364626 301 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL354868.1-201ENST00000417077 482 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 CCDC58P2-201ENST00000417131 366 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 MTCO1P54-201ENST00000430139 712 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ARAFP2-201ENST00000440565 559 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 GAPDHP39-201ENST00000481866 979 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 CDH12P2-201ENST00000504393 298 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 OR4D12P-201ENST00000509361 911 ntBASIC6.23□□□□□ -1.41
FOXP3Q9BZS1 AC104108.1-201ENST00000509930 412 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms