Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC121333.1-201ENST00000567488 2709 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC100810.3-201ENST00000633189 2240 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RPL4P3-201ENST00000428881 1311 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SSXP3-201ENST00000442971 1300 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 DDX11L16-201ENST00000507418 1306 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 DDX50P1-201ENST00000438163 2400 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SNORA33.2-201ENST00000365413 134 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RIT1-201ENST00000368322 855 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC117470.1-201ENST00000381974 330 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MIR25-201ENST00000384816 84 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MIR199B-201ENST00000384849 110 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MIR1-2-201ENST00000384961 85 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MIR555-201ENST00000384987 96 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MIR559-201ENST00000385188 96 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL592114.1-201ENST00000403842 483 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL096800.1-201ENST00000405326 893 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RNU2-9P-201ENST00000410194 145 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RNU4-26P-201ENST00000410270 107 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RN7SKP235-201ENST00000410662 305 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC103563.8-201ENST00000415716 318 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CHEK2P3-201ENST00000416118 248 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL451054.2-201ENST00000420896 202 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC012065.2-201ENST00000421295 375 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 COX6CP15-201ENST00000426313 211 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC011998.2-201ENST00000430884 473 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC091390.2-201ENST00000432573 374 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 USP24P1-201ENST00000433802 779 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC105052.2-201ENST00000434317 794 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC024082.2-201ENST00000434771 238 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL022721.1-201ENST00000436521 505 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 YWHAZP8-201ENST00000436935 731 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC083822.1-201ENST00000438001 201 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 BNIP3P2-201ENST00000441221 577 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC114495.1-201ENST00000441274 436 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CEACAMP9-201ENST00000442990 513 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL445686.1-201ENST00000443086 348 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SPRYD7P1-201ENST00000443861 570 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 OR7H1P-201ENST00000448965 922 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC104843.1-201ENST00000451203 319 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 MTND3P16-201ENST00000452205 344 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 NANOGP10-201ENST00000453325 895 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC108059.3-201ENST00000456388 214 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 PET100-201ENST00000456958 219 ntTSL 2 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC234782.3-201ENST00000461229 433 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RN7SL420P-201ENST00000463843 298 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 RN7SL69P-201ENST00000468423 272 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 CBX5P1-201ENST00000468470 561 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AC087879.1-201ENST00000474343 374 ntBASIC1.98□□□□□ -2.09
LCE3DQ9BYE3 AP001318.1-201ENST00000476981 321 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms