Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 RPL7P31-201ENST00000450192 724 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AP000797.1-201ENST00000478870 387 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 RPL7P24-201ENST00000493052 752 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC108078.3-201ENST00000502633 489 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC105252.1-201ENST00000503089 286 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC011853.1-201ENST00000518911 454 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC036111.2-201ENST00000533247 901 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC124947.2-202ENST00000552735 133 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL845552.1-201ENST00000556820 323 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC002519.2-203ENST00000567043 837 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC138915.2-201ENST00000569776 97 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 OR8G7P-201ENST00000616658 848 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC145207.9-201ENST00000623802 325 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AP000648.2-201ENST00000624182 404 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC073488.6-201ENST00000632293 754 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC119674.1-213ENST00000641177 1386 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC019072.1-201ENST00000604535 1551 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL133243.2-201ENST00000610331 1621 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL121950.1-201ENST00000624993 2077 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC007996.1-201ENST00000620414 2821 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 IGKV7-3-201ENST00000357453 298 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNU6-433P-201ENST00000363216 104 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNU1-49P-201ENST00000363468 159 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNU4-12P-201ENST00000365233 139 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RPL23AP29-201ENST00000397284 453 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL139098.1-201ENST00000407291 389 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNA5SP115-201ENST00000411160 107 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RN7SKP108-201ENST00000411367 328 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC000111.3-201ENST00000433478 193 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL831737.1-201ENST00000441288 271 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RPL5P7-201ENST00000444235 813 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AL161722.1-201ENST00000446972 1032 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 ELOCP23-201ENST00000452014 332 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNU7-27P-201ENST00000459281 62 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 SNORD42A-201ENST00000459584 64 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC112206.1-201ENST00000468416 477 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RPS3AP17-201ENST00000472594 777 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 HMGB1P36-201ENST00000487709 576 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC022483.1-201ENST00000514020 567 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 HSD3BP3-201ENST00000514706 994 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 RNU6-885P-201ENST00000516607 104 ntBASIC5.86□□□□□ -1.47
PTCHD1Q96NR3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms