Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ST13P16-201ENST00000401760 781 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.13□□□□□ -1.43
USP47Q96K76 RPL23AP25-201ENST00000430973 463 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.13□□□□□ -1.43
USP47Q96K76 RPL7P33-201ENST00000444159 742 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.13□□□□□ -1.43
USP47Q96K76 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 AC041039.1-201ENST00000485656 536 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 RPL21P129-201ENST00000491732 478 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 ATP1B1P1-201ENST00000509767 915 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.13□□□□□ -1.43
USP47Q96K76 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP47Q96K76 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.13□□□□□ -1.43
USP47Q96K76 ZYXP1-201ENST00000617638 118 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
USP47Q96K76 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.13□□□□□ -1.43
USP47Q96K76 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
USP47Q96K76 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP47Q96K76 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP47Q96K76 ASNSP1-204ENST00000641977 1664 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 IQCB2P-201ENST00000401788 1633 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 AC104118.1-201ENST00000607625 1589 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.12□□□□□ -1.43
USP47Q96K76 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 SNORA70C-201ENST00000384538 135 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AL050305.1-201ENST00000399993 1230 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 SNORA11F-201ENST00000408237 128 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 MIR1911-201ENST00000410783 80 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 NRBF2P2-201ENST00000413087 861 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 TRGV5P-201ENST00000419915 354 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 MFSD13B-201ENST00000420133 1290 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AL358176.3-201ENST00000420757 454 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.12□□□□□ -1.43
USP47Q96K76 AL158073.1-201ENST00000426848 1104 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.12□□□□□ -1.43
USP47Q96K76 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.12□□□□□ -1.43
USP47Q96K76 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 RPL35AP15-201ENST00000468042 339 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 RPL23AP65-201ENST00000475608 468 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.12□□□□□ -1.43
USP47Q96K76 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.12□□□□□ -1.43
USP47Q96K76 RPL21P7-201ENST00000557463 483 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC106785.1-201ENST00000565935 262 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 AC023043.4-201ENST00000612081 449 ntBASIC6.12□□□□□ -1.43
USP47Q96K76 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USP47Q96K76 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
USP47Q96K76 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
USP47Q96K76 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP47Q96K76 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 RNU1-64P-201ENST00000365443 163 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AC044797.1-201ENST00000445744 679 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.11□□□□□ -1.43
USP47Q96K76 RN7SL812P-201ENST00000493791 279 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.11□□□□□ -1.43
USP47Q96K76 BTG4P1-201ENST00000510421 183 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.11□□□□□ -1.43
USP47Q96K76 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.11□□□□□ -1.43
USP47Q96K76 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.11□□□□□ -1.43
USP47Q96K76 AC011477.5-201ENST00000586571 259 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AC093227.2-201ENST00000589357 285 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AC114781.5-201ENST00000615297 108 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 AP000843.1-201ENST00000624880 701 ntBASIC6.11□□□□□ -1.43
USP47Q96K76 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP47Q96K76 AL158163.1-201ENST00000603915 1649 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 RNU1-85P-201ENST00000364127 164 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 RNA5SP22-201ENST00000365393 109 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
USP47Q96K76 ACTR3P2-201ENST00000439585 1257 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP47Q96K76 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.1□□□□□ -1.43
USP47Q96K76 RN7SL303P-201ENST00000469773 251 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.1□□□□□ -1.43
USP47Q96K76 PGBD4P4-201ENST00000509673 613 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.1□□□□□ -1.43
USP47Q96K76 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP47Q96K76 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.1□□□□□ -1.43
USP47Q96K76 OR7A8P-201ENST00000595427 913 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 ARF4P1-201ENST00000605447 541 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 AC008013.2-202ENST00000637965 364 ntBASIC6.1□□□□□ -1.43
USP47Q96K76 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.1□□□□□ -1.43
USP47Q96K76 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP47Q96K76 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
USP47Q96K76 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP47Q96K76 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP47Q96K76 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms