Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 MTND5P10-201ENST00000603719 1809 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-CQ95604 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
HLA-CQ95604 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
HLA-CQ95604 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 Y_RNA.530-201ENST00000384587 101 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 MIR1-2-201ENST00000384961 85 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AL096800.1-201ENST00000405326 893 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 GAPDHP59-201ENST00000435908 267 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-CQ95604 RPL32P28-201ENST00000443577 397 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AL450996.1-201ENST00000445574 1202 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 HMGB3P22-202ENST00000451823 572 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AC091685.2-201ENST00000454924 864 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AP1S2P1-201ENST00000457344 379 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 SNORA81.1-201ENST00000458922 177 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 RN7SL413P-201ENST00000482700 297 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 AF213884.1-201ENST00000488102 463 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 TMEM251P1-201ENST00000503717 318 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 TTC39CP1-201ENST00000512513 755 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.37□□□□□ -1.23
HLA-CQ95604 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-CQ95604 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.37□□□□□ -1.23
HLA-CQ95604 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 RMST_9.1-201ENST00000619945 193 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 Z69720.2-201ENST00000624755 279 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 AC016251.1-201ENST00000624299 4198 ntBASIC7.37□□□□□ -1.23
HLA-CQ95604 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
HLA-CQ95604 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.37□□□□□ -1.23
HLA-CQ95604 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 MAPK10-343ENST00000641677 2546 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.36□□□□□ -1.23
HLA-CQ95604 OR1S2-201ENST00000302592 978 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HLA-CQ95604 Y_RNA.135-201ENST00000363439 95 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 Y_RNA.158-201ENST00000363651 101 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 U3.12-201ENST00000364498 214 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 SNORD37.1-201ENST00000390968 65 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 ARL5AP1-201ENST00000418991 388 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 RPL23AP30-201ENST00000432419 501 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.36□□□□□ -1.23
HLA-CQ95604 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC107399.1-201ENST00000451226 265 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.36□□□□□ -1.23
HLA-CQ95604 RN7SL88P-201ENST00000480166 299 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 RPL23AP41-201ENST00000484754 458 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC098591.2-201ENST00000510152 315 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 Y_RNA.665-201ENST00000516177 98 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 RNU6-1271P-201ENST00000517049 105 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.36□□□□□ -1.23
HLA-CQ95604 AC005519.1-201ENST00000554490 601 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 HSPE1P2-201ENST00000554777 306 ntBASIC7.36□□□□□ -1.23
HLA-CQ95604 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms