Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL9Q8NET4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTL9Q8NET4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC139769.1-204ENST00000472297 1931 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 RNU1-132P-201ENST00000364300 164 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 AL121878.1-201ENST00000418638 859 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 RPL36AP10-201ENST00000421785 322 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 RPL21P91-201ENST00000429231 479 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 BMS1P19-201ENST00000433925 393 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC022916.3-201ENST00000592961 742 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 MIR8069-1-201ENST00000616627 86 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 MIR8069-2-201ENST00000621412 86 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC008785.1-201ENST00000624475 456 ntBASIC5.5□□□□□ -1.53
RTL9Q8NET4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTL9Q8NET4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.5□□□□□ -1.53
RTL9Q8NET4 AC093849.1-201ENST00000563631 2209 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 MIR331-201ENST00000362302 94 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 RNA5SP151-201ENST00000365632 117 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 SNORA74C-2-201ENST00000411179 201 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 ARAFP1-201ENST00000422172 605 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 RNA5SP446-201ENST00000515955 82 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 MIR2116-201ENST00000517221 80 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 MED28P5-201ENST00000528254 438 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 LSM3P2-201ENST00000551246 273 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 MIR4472-2-201ENST00000582069 67 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.49□□□□□ -1.53
RTL9Q8NET4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTL9Q8NET4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.49□□□□□ -1.53
RTL9Q8NET4 AL359837.1-201ENST00000381357 287 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 AL022722.2-201ENST00000402519 180 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 RPS26P4-201ENST00000431743 355 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 RPL23AP52-201ENST00000439311 478 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 RPL35P6-201ENST00000490024 372 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 AC108475.1-201ENST00000507880 950 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 MIR4429-201ENST00000580105 73 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 AC006130.2-201ENST00000586202 326 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 AP003497.2-201ENST00000624220 967 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 AL139254.3-201ENST00000641097 674 ntBASIC5.48□□□□□ -1.53
RTL9Q8NET4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RTL9Q8NET4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RTL9Q8NET4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms