Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 RPL23AP37-201ENST00000479658 549 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 RN7SL447P-201ENST00000494711 245 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC098799.3-201ENST00000506095 438 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC092709.1-201ENST00000521355 1045 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 HMGB1P40-201ENST00000525121 540 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC124293.1-201ENST00000530034 493 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC114947.2-201ENST00000565748 2125 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC012146.2-201ENST00000576545 416 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 PRPF19P1-201ENST00000584766 898 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC115085.1-201ENST00000588924 229 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC011445.2-201ENST00000599274 173 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC123786.2-201ENST00000603459 275 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 RNU4-5P-201ENST00000607255 135 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC007204.2-201ENST00000615022 616 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 SNORA11.6-201ENST00000619030 128 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC016717.3-201ENST00000624730 554 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AP003400.3-201ENST00000624904 346 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 AL049767.1-202ENST00000637826 242 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CX3CL1P78423 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 AL731566.1-201ENST00000620490 1937 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 PCAT14-202ENST00000627127 3935 ntBASIC4.26□□□□□ -1.73
CX3CL1P78423 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CL1P78423 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CL1P78423 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CL1P78423 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AP001642.1-201ENST00000624727 2117 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 ZNF652P1-201ENST00000442420 1309 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CL1P78423 ANKRD36P1-201ENST00000344424 659 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 RNA5SP132-201ENST00000364725 118 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CX3CL1P78423 RNU1-77P-201ENST00000390868 162 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 Y_RNA.578-201ENST00000390903 88 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AL512422.1-201ENST00000407033 553 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 OR3A2-201ENST00000408891 1076 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 RNA5SP487-201ENST00000410186 122 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 MTND4P3-201ENST00000417829 541 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AL133325.1-201ENST00000421090 382 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 OR5AW1P-201ENST00000426334 1006 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.25□□□□□ -1.73
CX3CL1P78423 CYCSP12-201ENST00000437729 300 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 TPMTP4-201ENST00000450749 678 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AL035090.1-201ENST00000454835 332 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AC091959.2-201ENST00000477363 321 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 RPL5P22-201ENST00000480199 884 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AC022133.1-201ENST00000490961 571 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 RN7SL101P-201ENST00000496350 279 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CL1P78423 HPRT1P2-201ENST00000505250 544 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CL1P78423 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CL1P78423 RNA5SP362-201ENST00000516048 118 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 CDC42P3-201ENST00000518493 633 ntBASIC4.25□□□□□ -1.73
CX3CL1P78423 AC034205.1-201ENST00000520621 638 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms