Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL118522.2-201ENST00000616045 615 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 MIR6826-201ENST00000617808 98 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 MIR6837-201ENST00000620884 64 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.96□□□□□ -1.62
RPS3AP61247 AC013437.2-201ENST00000639587 677 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPS3AP61247 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPS3AP61247 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPS3AP61247 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RPS3AP61247 AL353743.4-201ENST00000422653 1547 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.96□□□□□ -1.62
RPS3AP61247 AL627171.1-201ENST00000618845 1308 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 AC134882.1-201ENST00000603738 1676 ntBASIC4.96□□□□□ -1.62
RPS3AP61247 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
RPS3AP61247 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.95□□□□□ -1.62
RPS3AP61247 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC100757.1-201ENST00000616872 1835 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AL450326.2-201ENST00000421913 1962 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC046144.1-201ENST00000478559 1853 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 BMS1P3-201ENST00000372011 932 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 OR1L6-202ENST00000373684 1044 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 SNORD56.6-201ENST00000384569 71 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 SNORA68.2-201ENST00000391263 128 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC009804.1-201ENST00000400949 179 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RSL24D1P1-201ENST00000404972 493 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RN7SKP229-201ENST00000410465 302 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RN7SKP59-201ENST00000410520 314 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RN7SKP247-201ENST00000411094 308 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 CYCSP10-201ENST00000417973 294 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RPL36AP10-201ENST00000421785 322 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RPL7AP49-201ENST00000429522 581 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AL591438.1-201ENST00000433508 581 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC105399.1-202ENST00000447303 205 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AL050341.1-201ENST00000447743 313 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 RPL35AP19-201ENST00000469425 329 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RN7SL184P-201ENST00000488308 297 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RN7SL547P-201ENST00000490793 290 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 HPRT1P2-201ENST00000505250 544 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC021106.1-201ENST00000509020 1058 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 PRELID3BP4-201ENST00000515476 571 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 RNA5SP360-201ENST00000516555 118 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 HMGB1P23-201ENST00000518743 568 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 IGKV2-18-201ENST00000522607 343 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 AC107918.3-201ENST00000533272 382 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC024940.3-201ENST00000538551 316 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC006349.1-201ENST00000555526 235 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC233280.2-201ENST00000603917 1070 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC011458.1-201ENST00000604034 617 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 SUGT1P3-202ENST00000604259 383 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AP000894.4-201ENST00000610185 483 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC022467.1-201ENST00000614738 749 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC037198.3-201ENST00000616754 526 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC015914.2-201ENST00000618167 288 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC005840.5-201ENST00000619166 599 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 AC017104.5-201ENST00000637647 639 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 AC074101.1-201ENST00000637861 241 ntBASIC4.95□□□□□ -1.62
RPS3AP61247 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RPS3AP61247 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
RPS3AP61247 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPS3AP61247 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
RPS3AP61247 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
RPS3AP61247 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.94□□□□□ -1.62
RPS3AP61247 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 SNORA48.4-201ENST00000391089 134 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPS3AP61247 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.94□□□□□ -1.62
RPS3AP61247 NPM1P4-201ENST00000414095 812 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms