Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-1308P-201ENST00000516817 103 ntBASIC4.78□□□□□ -1.64
PDX1P52945 RNU6-334P-201ENST00000517072 102 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.78□□□□□ -1.64
PDX1P52945 AC012339.2-201ENST00000523996 453 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
PDX1P52945 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 AL512310.9-201ENST00000553311 948 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC006349.1-201ENST00000555526 235 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.78□□□□□ -1.64
PDX1P52945 RN7SL690P-201ENST00000582087 240 ntBASIC4.78□□□□□ -1.64
PDX1P52945 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.78□□□□□ -1.64
PDX1P52945 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDX1P52945 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDX1P52945 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
PDX1P52945 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.78□□□□□ -1.64
PDX1P52945 AC010928.1-201ENST00000592477 1447 ntBASIC4.78□□□□□ -1.64
PDX1P52945 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 AC107021.2-201ENST00000567714 2095 ntBASIC4.77□□□□□ -1.65
PDX1P52945 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDX1P52945 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 AL355143.1-201ENST00000407101 841 ntBASIC4.77□□□□□ -1.65
PDX1P52945 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 MTCYBP21-201ENST00000443300 1113 ntBASIC4.77□□□□□ -1.65
PDX1P52945 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 HMGB1P5-202ENST00000451497 985 ntBASIC4.77□□□□□ -1.65
PDX1P52945 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC034205.1-201ENST00000520621 638 ntBASIC4.77□□□□□ -1.65
PDX1P52945 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.77□□□□□ -1.65
PDX1P52945 SOX5P1-201ENST00000524155 1127 ntBASIC4.77□□□□□ -1.65
PDX1P52945 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDX1P52945 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 DNAJC19P3-201ENST00000594491 331 ntBASIC4.77□□□□□ -1.65
PDX1P52945 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.77□□□□□ -1.65
PDX1P52945 AL135786.2-201ENST00000608422 615 ntBASIC4.77□□□□□ -1.65
PDX1P52945 AL451049.1-201ENST00000608672 497 ntBASIC4.77□□□□□ -1.65
PDX1P52945 MIR8084-201ENST00000614105 89 ntBASIC4.77□□□□□ -1.65
PDX1P52945 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 SPATA2P1-201ENST00000431223 2055 ntBASIC4.77□□□□□ -1.65
PDX1P52945 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 AC104623.2-202ENST00000623477 4002 ntBASIC4.77□□□□□ -1.65
PDX1P52945 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.77□□□□□ -1.65
PDX1P52945 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDX1P52945 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
PDX1P52945 AL132640.2-201ENST00000559968 1698 ntBASIC4.77□□□□□ -1.65
PDX1P52945 ZNF652P1-201ENST00000442420 1309 ntBASIC4.76□□□□□ -1.65
PDX1P52945 TCP1P3-201ENST00000414406 1498 ntBASIC4.76□□□□□ -1.65
PDX1P52945 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.76□□□□□ -1.65
PDX1P52945 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDX1P52945 RNU6-252P-201ENST00000363232 107 ntBASIC4.76□□□□□ -1.65
PDX1P52945 RNU4-7P-201ENST00000364758 141 ntBASIC4.76□□□□□ -1.65
PDX1P52945 SNORA62-201ENST00000365493 153 ntBASIC4.76□□□□□ -1.65
PDX1P52945 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PDX1P52945 AC068538.1-201ENST00000376856 336 ntBASIC4.76□□□□□ -1.65
PDX1P52945 RNU6-796P-201ENST00000391086 107 ntBASIC4.76□□□□□ -1.65
PDX1P52945 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 SNORA11-201ENST00000408789 128 ntBASIC4.76□□□□□ -1.65
PDX1P52945 P2RY10P2-201ENST00000416730 913 ntBASIC4.76□□□□□ -1.65
PDX1P52945 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.76□□□□□ -1.65
PDX1P52945 RPL18P10-201ENST00000425606 538 ntBASIC4.76□□□□□ -1.65
PDX1P52945 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.76□□□□□ -1.65
PDX1P52945 RPL23AP4-201ENST00000427757 463 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms