Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 RARSP1-201ENST00000542842 1418 ntBASIC4.3□□□□□ -1.72
CDX1P47902 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 OR4F13P-202ENST00000560066 2054 ntBASIC4.3□□□□□ -1.72
CDX1P47902 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 RNU1-94P-201ENST00000362627 173 ntBASIC4.3□□□□□ -1.72
CDX1P47902 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDX1P47902 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 U6.112-201ENST00000384129 70 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC005042.1-201ENST00000393397 800 ntBASIC4.3□□□□□ -1.72
CDX1P47902 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 RN7SKP59-201ENST00000410520 314 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.3□□□□□ -1.72
CDX1P47902 AC007161.1-204ENST00000423039 460 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 EEF1A1P1-201ENST00000447052 739 ntBASIC4.3□□□□□ -1.72
CDX1P47902 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 AC026348.1-201ENST00000462549 1053 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC112206.1-201ENST00000468416 477 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AP000797.2-201ENST00000475768 606 ntBASIC4.3□□□□□ -1.72
CDX1P47902 RN7SL629P-201ENST00000489622 285 ntBASIC4.3□□□□□ -1.72
CDX1P47902 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.3□□□□□ -1.72
CDX1P47902 AC010374.1-201ENST00000503762 1237 ntBASIC4.3□□□□□ -1.72
CDX1P47902 IGBP1P5-201ENST00000507524 1000 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDX1P47902 AC063949.1-201ENST00000552900 865 ntBASIC4.3□□□□□ -1.72
CDX1P47902 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.3□□□□□ -1.72
CDX1P47902 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 MIR4789-201ENST00000577469 82 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC090312.2-201ENST00000582687 378 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.3□□□□□ -1.72
CDX1P47902 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 EIF1P6-201ENST00000600054 334 ntBASIC4.3□□□□□ -1.72
CDX1P47902 NTAN1P1-201ENST00000603150 646 ntBASIC4.3□□□□□ -1.72
CDX1P47902 SUGT1P3-202ENST00000604259 383 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC090948.2-201ENST00000607363 564 ntBASIC4.3□□□□□ -1.72
CDX1P47902 SNORD91B-202ENST00000608459 222 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC018645.2-201ENST00000609151 472 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AL118522.2-201ENST00000616045 615 ntBASIC4.3□□□□□ -1.72
CDX1P47902 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 AC017104.5-201ENST00000637647 639 ntBASIC4.3□□□□□ -1.72
CDX1P47902 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 CASC19-264ENST00000641912 1184 ntBASIC4.3□□□□□ -1.72
CDX1P47902 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDX1P47902 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 AC022031.1-201ENST00000585985 2593 ntBASIC4.3□□□□□ -1.72
CDX1P47902 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.3□□□□□ -1.72
CDX1P47902 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDX1P47902 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.3□□□□□ -1.72
CDX1P47902 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDX1P47902 CYP1D1P-201ENST00000416662 1433 ntBASIC4.29□□□□□ -1.72
CDX1P47902 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 ASNSP1-201ENST00000518311 1939 ntBASIC4.29□□□□□ -1.72
CDX1P47902 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
CDX1P47902 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 ZNF849P-201ENST00000594711 1566 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC104118.1-201ENST00000607625 1589 ntBASIC4.29□□□□□ -1.72
CDX1P47902 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDX1P47902 AL121886.1-201ENST00000358609 435 ntBASIC4.29□□□□□ -1.72
CDX1P47902 RNU6-207P-201ENST00000384137 107 ntBASIC4.29□□□□□ -1.72
CDX1P47902 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.29□□□□□ -1.72
CDX1P47902 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.29□□□□□ -1.72
CDX1P47902 AP000534.2-201ENST00000412729 568 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.29□□□□□ -1.72
CDX1P47902 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.29□□□□□ -1.72
CDX1P47902 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.29□□□□□ -1.72
CDX1P47902 YWHAEP5-201ENST00000431545 765 ntBASIC4.29□□□□□ -1.72
CDX1P47902 CFL1P1-202ENST00000432948 411 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.29□□□□□ -1.72
CDX1P47902 RPL19P16-201ENST00000433839 588 ntBASIC4.29□□□□□ -1.72
CDX1P47902 ELOCP11-201ENST00000436690 332 ntBASIC4.29□□□□□ -1.72
CDX1P47902 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.29□□□□□ -1.72
CDX1P47902 MTND6P18-201ENST00000439477 513 ntBASIC4.29□□□□□ -1.72
CDX1P47902 ACTR3P2-201ENST00000439585 1257 ntBASIC4.29□□□□□ -1.72
CDX1P47902 AC092809.1-201ENST00000441469 474 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms