Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL121890.3-201ENST00000618494 516 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC091046.2-201ENST00000620775 665 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.06□□□□□ -1.44
COL15A1P39059 AL356118.1-201ENST00000635272 1078 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC017002.4-201ENST00000604721 1525 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC120338.1-201ENST00000625074 1541 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL15A1P39059 RNA5SP509-201ENST00000364577 119 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC012519.1-201ENST00000424588 610 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC011242.1-201ENST00000433596 1158 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 RPS17P8-201ENST00000434525 335 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 CBX1P1-201ENST00000440184 427 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC079168.2-201ENST00000453977 416 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 RN7SL558P-201ENST00000497468 299 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 HMGN2P47-201ENST00000559378 272 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 AC069366.1-201ENST00000583159 838 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.06□□□□□ -1.44
COL15A1P39059 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC115286.1-201ENST00000604298 434 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC015849.2-201ENST00000605738 409 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 RNU6-84P-201ENST00000607737 102 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC092653.1-201ENST00000608509 531 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 AC090912.3-201ENST00000609775 533 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 MIR1264-201ENST00000616374 69 ntBASIC6.06□□□□□ -1.44
COL15A1P39059 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.06□□□□□ -1.44
COL15A1P39059 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.05□□□□□ -1.44
COL15A1P39059 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.05□□□□□ -1.44
COL15A1P39059 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 AL450345.1-202ENST00000605741 3881 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 RN7SKP227-201ENST00000364445 330 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL15A1P39059 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL15A1P39059 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 AC140479.3-201ENST00000418944 1126 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 RPL17P36-201ENST00000420302 549 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 GAPDHP49-201ENST00000421421 961 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 AC104333.2-201ENST00000422630 192 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL15A1P39059 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.05□□□□□ -1.44
COL15A1P39059 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.05□□□□□ -1.44
COL15A1P39059 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.05□□□□□ -1.44
COL15A1P39059 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.05□□□□□ -1.44
COL15A1P39059 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.05□□□□□ -1.44
COL15A1P39059 AC127024.5-201ENST00000580085 462 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.05□□□□□ -1.44
COL15A1P39059 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.05□□□□□ -1.44
COL15A1P39059 MIR6716-201ENST00000613413 80 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 AC004232.3-201ENST00000622977 525 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 AP003476.1-201ENST00000623984 516 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 AC090506.2-201ENST00000624521 419 ntBASIC6.05□□□□□ -1.44
COL15A1P39059 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
COL15A1P39059 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 AP002512.4-202ENST00000641599 4530 ntBASIC6.04□□□□□ -1.44
COL15A1P39059 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 AC092111.2-201ENST00000611627 1414 ntBASIC6.04□□□□□ -1.44
COL15A1P39059 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL15A1P39059 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL15A1P39059 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms