Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 AC010476.1-201ENST00000519111 851 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXA9P31269 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXA9P31269 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA9P31269 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA9P31269 AP001160.4-201ENST00000596971 382 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 AL008729.2-201ENST00000606393 473 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 AC114781.5-201ENST00000615297 108 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA9P31269 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXA9P31269 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HOXA9P31269 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.8□□□□□ -1.64
HOXA9P31269 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA9P31269 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXA9P31269 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA9P31269 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXA9P31269 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA9P31269 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA9P31269 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA9P31269 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXA9P31269 Y_RNA.126-201ENST00000363382 111 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 MIR1271-201ENST00000408537 86 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA9P31269 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA9P31269 RPL23AP93-201ENST00000440847 484 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC104651.2-201ENST00000447549 528 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA9P31269 ISCUP1-201ENST00000454451 448 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXA9P31269 AGGF1P3-201ENST00000493675 1213 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA9P31269 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA9P31269 IGLVIV-65-201ENST00000517313 360 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA9P31269 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA9P31269 AC007224.1-201ENST00000564410 144 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA9P31269 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA9P31269 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC023043.4-201ENST00000612081 449 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AL445567.2-201ENST00000618935 498 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 AC022106.2-201ENST00000620114 757 ntBASIC4.79□□□□□ -1.64
HOXA9P31269 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
HOXA9P31269 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA9P31269 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 AC010300.1-201ENST00000600671 5134 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 DHX9P1-201ENST00000436565 3076 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXA9P31269 SNORA57.1-201ENST00000391227 145 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXA9P31269 ST13P16-201ENST00000401760 781 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 RN7SKP263-201ENST00000411194 309 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 AC011933.1-201ENST00000413334 321 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 TMSB10P2-201ENST00000416049 131 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 RPL17P36-201ENST00000420302 549 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 AL358176.3-201ENST00000420757 454 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 RAD23BP1-201ENST00000421404 1227 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 RPS27AP12-201ENST00000429552 465 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA9P31269 AC116533.1-201ENST00000459748 321 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA9P31269 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 PSMB7P1-201ENST00000556349 514 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 AC021483.2-201ENST00000567415 758 ntBASIC4.78□□□□□ -1.64
HOXA9P31269 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA9P31269 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA9P31269 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HOXA9P31269 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA9P31269 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA9P31269 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA9P31269 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXA9P31269 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HOXA9P31269 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 AC112198.2-201ENST00000426589 6996 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXA9P31269 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
HOXA9P31269 OR5P1P-201ENST00000299512 925 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 RNA5SP515-201ENST00000364570 118 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AMZ2P2-201ENST00000406819 1057 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA9P31269 E2F6P2-201ENST00000420708 748 ntBASIC4.77□□□□□ -1.65
HOXA9P31269 AP001324.1-201ENST00000428553 399 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms