Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MTND4P18-201ENST00000447010 465 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 ST13P20-201ENST00000447996 1065 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC104763.1-201ENST00000475274 360 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC072039.1-201ENST00000477611 581 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 RPL38P3-201ENST00000484463 213 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 RPS7P6-201ENST00000485777 579 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 RPL12P30-201ENST00000488389 499 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.87□□□□□ -1.47
COL6A2P12110 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 GLUD1P3-202ENST00000508551 200 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC138517.1-201ENST00000515724 568 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 MTND4LP26-201ENST00000518144 282 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL6A2P12110 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.87□□□□□ -1.47
COL6A2P12110 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AL512347.1-201ENST00000566420 503 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.87□□□□□ -1.47
COL6A2P12110 AL513327.3-201ENST00000602618 469 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AP003973.1-201ENST00000604639 691 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 NANOGP3-201ENST00000605855 286 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AL391497.1-201ENST00000608671 547 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AL080312.2-201ENST00000613001 630 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 SNORA11.6-201ENST00000619030 128 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC073534.2-201ENST00000620377 381 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 MIR6823-201ENST00000622118 61 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 AC073348.1-201ENST00000623002 331 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL6A2P12110 AC010325.3-201ENST00000641084 394 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.87□□□□□ -1.47
COL6A2P12110 RBMY1HP-201ENST00000382759 1389 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 LYARP1-201ENST00000436977 1501 ntBASIC5.87□□□□□ -1.47
COL6A2P12110 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL6A2P12110 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL6A2P12110 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COL6A2P12110 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 GNL2P1-201ENST00000451274 2190 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 Y_RNA.18-201ENST00000362461 102 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 SNORA64.3-201ENST00000365647 134 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL6A2P12110 ATP5F1P4-201ENST00000397288 746 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 PIGPP2-201ENST00000411569 458 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 USP9YP33-201ENST00000412220 421 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 OR51A3P-201ENST00000413596 924 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 CYCSP46-201ENST00000423569 204 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 RPL21P110-201ENST00000433345 446 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 FTLP8-201ENST00000446770 267 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 RPS4XP12-201ENST00000461747 709 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.86□□□□□ -1.47
COL6A2P12110 MIR2117-201ENST00000516780 80 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 IGKV2D-10-201ENST00000520194 281 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 AC116917.1-201ENST00000520558 305 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL6A2P12110 OR8Q1P-201ENST00000526467 655 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.86□□□□□ -1.47
COL6A2P12110 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.86□□□□□ -1.47
COL6A2P12110 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.86□□□□□ -1.47
COL6A2P12110 RPSAP75-201ENST00000605848 301 ntBASIC5.86□□□□□ -1.47
COL6A2P12110 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms