Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AK4P6-201ENST00000505168 528 ntBASIC4.34□□□□□ -1.71
TNFP01375 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.34□□□□□ -1.71
TNFP01375 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFP01375 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.34□□□□□ -1.71
TNFP01375 AC103792.1-201ENST00000603591 919 ntBASIC4.34□□□□□ -1.71
TNFP01375 AC079587.1-201ENST00000603846 277 ntBASIC4.34□□□□□ -1.71
TNFP01375 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.34□□□□□ -1.71
TNFP01375 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TNFP01375 MIR6891-201ENST00000618788 93 ntBASIC4.34□□□□□ -1.71
TNFP01375 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.34□□□□□ -1.71
TNFP01375 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TNFP01375 EIF2AP4-201ENST00000424793 1781 ntBASIC4.34□□□□□ -1.71
TNFP01375 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
TNFP01375 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
TNFP01375 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TNFP01375 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TNFP01375 PCAT14-202ENST00000627127 3935 ntBASIC4.34□□□□□ -1.72
TNFP01375 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.34□□□□□ -1.72
TNFP01375 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFP01375 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFP01375 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 SAMMSON-213ENST00000641336 1521 ntBASIC4.33□□□□□ -1.72
TNFP01375 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TNFP01375 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFP01375 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 AL035696.2-201ENST00000407941 709 ntBASIC4.33□□□□□ -1.72
TNFP01375 RNA5SP296-201ENST00000410523 111 ntBASIC4.33□□□□□ -1.72
TNFP01375 RN7SKP97-201ENST00000410966 333 ntBASIC4.33□□□□□ -1.72
TNFP01375 RPS20P14-201ENST00000412545 360 ntBASIC4.33□□□□□ -1.72
TNFP01375 AC062016.2-201ENST00000420950 676 ntBASIC4.33□□□□□ -1.72
TNFP01375 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFP01375 RPS20P4-201ENST00000461659 355 ntBASIC4.33□□□□□ -1.72
TNFP01375 UQCRHP4-201ENST00000471686 272 ntBASIC4.33□□□□□ -1.72
TNFP01375 AC091167.1-201ENST00000492017 396 ntBASIC4.33□□□□□ -1.72
TNFP01375 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TNFP01375 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFP01375 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFP01375 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.33□□□□□ -1.72
TNFP01375 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFP01375 AP001804.2-201ENST00000533932 910 ntBASIC4.33□□□□□ -1.72
TNFP01375 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.33□□□□□ -1.72
TNFP01375 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFP01375 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFP01375 AC020910.2-201ENST00000603635 610 ntBASIC4.33□□□□□ -1.72
TNFP01375 AC025175.1-201ENST00000606482 759 ntBASIC4.33□□□□□ -1.72
TNFP01375 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFP01375 AC234782.5-201ENST00000617723 324 ntBASIC4.33□□□□□ -1.72
TNFP01375 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TNFP01375 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
TNFP01375 AP003497.2-201ENST00000624220 967 ntBASIC4.33□□□□□ -1.72
TNFP01375 MIR3653-201ENST00000625572 110 ntBASIC4.33□□□□□ -1.72
TNFP01375 AC140479.6-201ENST00000633535 357 ntBASIC4.33□□□□□ -1.72
TNFP01375 AL139254.3-201ENST00000641097 674 ntBASIC4.33□□□□□ -1.72
TNFP01375 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFP01375 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TNFP01375 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TNFP01375 AC000374.1-201ENST00000434698 1745 ntBASIC4.32□□□□□ -1.72
TNFP01375 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TNFP01375 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFP01375 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFP01375 AC005261.4-201ENST00000600047 1385 ntBASIC4.32□□□□□ -1.72
TNFP01375 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
TNFP01375 SNORA70C-201ENST00000384538 135 ntBASIC4.32□□□□□ -1.72
TNFP01375 MIR921-201ENST00000401133 56 ntBASIC4.32□□□□□ -1.72
TNFP01375 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 OR6C64P-201ENST00000419708 825 ntBASIC4.32□□□□□ -1.72
TNFP01375 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
TNFP01375 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TNFP01375 Z74021.1-201ENST00000423610 407 ntBASIC4.32□□□□□ -1.72
TNFP01375 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TNFP01375 UBE2V1P3-201ENST00000439651 417 ntBASIC4.32□□□□□ -1.72
TNFP01375 AC114495.1-201ENST00000441274 436 ntBASIC4.32□□□□□ -1.72
TNFP01375 TPT1P1-201ENST00000458495 518 ntBASIC4.32□□□□□ -1.72
TNFP01375 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
TNFP01375 ATP1B1P1-201ENST00000509767 915 ntBASIC4.32□□□□□ -1.72
TNFP01375 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TNFP01375 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 CYCSP29-201ENST00000533731 318 ntBASIC4.32□□□□□ -1.72
TNFP01375 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.32□□□□□ -1.72
TNFP01375 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 SETP1-201ENST00000556014 845 ntBASIC4.32□□□□□ -1.72
TNFP01375 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 AC069366.1-201ENST00000583159 838 ntBASIC4.32□□□□□ -1.72
TNFP01375 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFP01375 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFP01375 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
TNFP01375 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TNFP01375 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms