Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OR6E1P-201ENST00000414424 923 ntBASIC6.64□□□□□ -1.35
SOX1O00570 Z93242.1-201ENST00000427102 353 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 AL390119.1-201ENST00000440329 312 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AL831737.1-201ENST00000441288 271 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AL022238.1-201ENST00000442557 355 ntBASIC6.64□□□□□ -1.35
SOX1O00570 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 GEMIN2P1-201ENST00000454246 752 ntBASIC6.64□□□□□ -1.35
SOX1O00570 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 RPL7P38-201ENST00000488396 739 ntBASIC6.64□□□□□ -1.35
SOX1O00570 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 PAICSP4-201ENST00000517543 1253 ntBASIC6.64□□□□□ -1.35
SOX1O00570 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 AL391840.1-201ENST00000571144 367 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC103792.1-201ENST00000603591 919 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AL022394.1-201ENST00000606979 292 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC011472.4-201ENST00000615848 491 ntBASIC6.64□□□□□ -1.35
SOX1O00570 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC009159.1-201ENST00000618386 642 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 AP003122.6-201ENST00000623831 495 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 AC138915.4-201ENST00000565549 4147 ntBASIC6.64□□□□□ -1.35
SOX1O00570 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SOX1O00570 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SOX1O00570 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 RNA5SP375-201ENST00000362975 119 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RNU5F-6P-201ENST00000362979 116 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RNA5SP65-201ENST00000363166 119 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RNU1-49P-201ENST00000363468 159 ntBASIC6.63□□□□□ -1.35
SOX1O00570 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 MIR217-201ENST00000384817 110 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RNU6-1300P-201ENST00000391046 108 ntBASIC6.63□□□□□ -1.35
SOX1O00570 MTCO3P40-201ENST00000392516 676 ntBASIC6.63□□□□□ -1.35
SOX1O00570 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 RPL21P111-201ENST00000418453 477 ntBASIC6.63□□□□□ -1.35
SOX1O00570 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX1O00570 AL009174.1-201ENST00000426577 416 ntBASIC6.63□□□□□ -1.35
SOX1O00570 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SOX1O00570 AL022578.1-201ENST00000439330 1433 ntBASIC6.63□□□□□ -1.35
SOX1O00570 ZNF733P-202ENST00000444809 1573 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RPL39P6-201ENST00000448289 150 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 snoU109.1-201ENST00000459339 135 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RN7SL72P-201ENST00000460697 269 ntBASIC6.63□□□□□ -1.35
SOX1O00570 RN7SL346P-201ENST00000491561 294 ntBASIC6.63□□□□□ -1.35
SOX1O00570 SNX5P1-201ENST00000505757 1041 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC097173.1-201ENST00000505862 819 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC024451.1-201ENST00000508013 779 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX1O00570 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX1O00570 MTCO1P35-201ENST00000515270 228 ntBASIC6.63□□□□□ -1.35
SOX1O00570 Y_RNA.710-201ENST00000516975 110 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC239860.2-201ENST00000525886 270 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX1O00570 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 AL442663.2-201ENST00000554385 511 ntBASIC6.63□□□□□ -1.35
SOX1O00570 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.63□□□□□ -1.35
SOX1O00570 AC018552.1-201ENST00000562099 811 ntBASIC6.63□□□□□ -1.35
SOX1O00570 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 AC139426.3-201ENST00000605648 2059 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC103710.1-201ENST00000610003 901 ntBASIC6.63□□□□□ -1.35
SOX1O00570 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms