Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP000619.2-201ENST00000546014 969 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 PCNPP1-201ENST00000552501 511 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC011453.2-201ENST00000603737 729 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL357094.1-201ENST00000603845 844 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC005084.1-201ENST00000605160 304 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL450336.1-201ENST00000605180 586 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC096586.1-201ENST00000610267 561 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC087683.2-201ENST00000611384 326 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 PART1_2.1-201ENST00000612397 250 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 FRG1HP-204ENST00000617940 757 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AL035461.2-201ENST00000619201 524 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC007342.8-201ENST00000623278 678 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC104985.3-201ENST00000623479 597 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 AC139713.2-210ENST00000641741 992 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 PROS2P-201ENST00000474651 1951 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL20A1Q9P218 VPS35P1-201ENST00000563400 1518 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 VN2R3P-201ENST00000422626 1412 ntBASIC5.74□□□□□ -1.49
COL20A1Q9P218 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.74□□□□□ -1.49
COL20A1Q9P218 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RN7SKP216-201ENST00000411050 312 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 RPL37P18-201ENST00000411602 243 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL592310.1-201ENST00000414330 671 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC092447.3-201ENST00000426027 686 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC093414.1-201ENST00000434712 514 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RPS29P9-201ENST00000440360 171 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RPL7AP61-201ENST00000443410 636 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RN7SL319P-201ENST00000480656 221 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RNA5SP303-201ENST00000516192 130 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 RN7SKP287-201ENST00000516546 266 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 RNA5SP392-201ENST00000516905 112 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC104417.1-201ENST00000523974 751 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC022884.2-201ENST00000578535 580 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC234772.3-201ENST00000602277 528 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC022022.2-201ENST00000602989 360 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC093424.1-201ENST00000604999 338 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC005377.1-201ENST00000605126 456 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC106052.1-201ENST00000608029 497 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 MIR7703-201ENST00000620784 77 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL20A1Q9P218 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
COL20A1Q9P218 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL20A1Q9P218 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.72□□□□□ -1.49
COL20A1Q9P218 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL20A1Q9P218 RNA5SP191-201ENST00000362585 102 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 SNORA48.4-201ENST00000391089 134 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 U3.32-201ENST00000408116 212 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 Y_RNA.625-201ENST00000411256 107 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 RPL12P9-201ENST00000412942 488 ntBASIC5.72□□□□□ -1.49
COL20A1Q9P218 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms