Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC131238.1-201ENST00000617135 328 ntBASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 AC107027.3-201ENST00000565095 3473 ntBASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO3Q9BXY4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 DDX18P3-201ENST00000404856 2007 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 MAPK10-253ENST00000641010 4072 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC005332.5-201ENST00000591222 2919 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 VN1R8P-201ENST00000407739 893 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 CEACAMP8-201ENST00000413902 580 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 OR51A6P-201ENST00000418680 1004 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AL360081.1-201ENST00000428299 555 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 MAPRE1P3-201ENST00000435438 796 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 GSTA7P-201ENST00000438425 448 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC104849.1-201ENST00000462623 405 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 RN7SL481P-201ENST00000477764 299 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC112184.1-201ENST00000505179 312 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 RN7SL176P-201ENST00000580352 264 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 AP003499.2-201ENST00000624100 483 ntBASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RSPO3Q9BXY4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 CYB5AP4-201ENST00000396692 399 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AL139039.2-201ENST00000407436 479 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 HMGB1P19-201ENST00000517578 577 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AC091042.1-201ENST00000579213 173 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 RN7SL690P-201ENST00000582087 240 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 RN7SL52P-201ENST00000584271 284 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 HMGB2P1-201ENST00000591146 634 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AC005034.4-201ENST00000603612 899 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 ZNF137P-201ENST00000456718 1920 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 MTCO1P22-201ENST00000604619 1360 ntBASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RSPO3Q9BXY4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms