Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 AL353763.2-201ENST00000623489 1903 ntBASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.84□□□□□ -1.32
COL25A1Q9BXS0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 CASC19-243ENST00000641588 1546 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RNU6-282P-201ENST00000365357 103 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 SET-203ENST00000372688 801 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RNU6-316P-201ENST00000391027 107 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 NDUFB4P5-201ENST00000415445 361 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 MRPL50P2-201ENST00000416821 482 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC005517.2-201ENST00000424673 553 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RPL31P35-201ENST00000431058 377 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC094019.1-201ENST00000434678 472 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL353662.1-201ENST00000439099 327 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC012512.1-201ENST00000446594 718 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL392103.1-201ENST00000447000 198 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 COX6CP18-201ENST00000448769 222 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC073415.1-201ENST00000449240 153 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 COPS8P2-201ENST00000473228 627 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RPL7AP23-201ENST00000482625 776 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC023194.1-201ENST00000493084 308 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RN7SL466P-201ENST00000497546 295 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 HMGB3P17-201ENST00000504195 649 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC048346.1-201ENST00000510247 144 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.672-201ENST00000516289 104 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC021001.1-201ENST00000518703 987 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 NRBF2P4-201ENST00000520874 850 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL133399.1-201ENST00000527476 298 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC007375.1-201ENST00000554513 578 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 BMS1P7-201ENST00000602440 1052 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL713866.2-201ENST00000603579 219 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 MIR378J-201ENST00000611988 109 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC233309.1-201ENST00000619522 751 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AC092650.2-201ENST00000619984 902 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 MRPS17P1-201ENST00000596009 3130 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 SEC63P2-201ENST00000503863 1939 ntBASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL25A1Q9BXS0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CASC19-221ENST00000641309 1382 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms