Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.812-201ENST00000610788 101 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL020991.1-201ENST00000612314 373 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.784-201ENST00000613803 101 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.787-201ENST00000616522 101 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.780-201ENST00000617336 101 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.801-201ENST00000619005 101 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC010338.1-201ENST00000621823 717 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC011815.3-201ENST00000624194 473 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MIR6863-201ENST00000636112 90 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AC114786.1-201ENST00000512892 1415 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 AL136984.1-201ENST00000607611 1893 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 QRSL1P1-201ENST00000400977 1540 ntBASIC5.28□□□□□ -1.56
SSBP3Q9BWW4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC006213.6-201ENST00000623722 4179 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RNU4-73P-201ENST00000363164 141 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 Y_RNA.295-201ENST00000364918 102 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 Y_RNA.296-201ENST00000364930 108 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 SNORA40.3-201ENST00000390964 122 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 SDCBPP3-201ENST00000419629 891 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 USP9YP9-201ENST00000429406 715 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 SEPT7P5-201ENST00000434048 306 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC104850.1-201ENST00000435940 476 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 HMGB1P7-201ENST00000450921 612 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 VDAC2P4-201ENST00000452925 711 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 GAPDHP39-201ENST00000481866 979 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 RPL37P23-201ENST00000492641 294 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 IMPA1P1-201ENST00000510718 842 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 ZNF519P4-201ENST00000514008 125 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC008802.1-201ENST00000519121 791 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC026826.3-201ENST00000561747 158 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC002310.3-201ENST00000569728 723 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC011497.2-201ENST00000600255 639 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 KC877982.1-201ENST00000602313 470 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LLPHP1-201ENST00000603571 367 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC024560.3-201ENST00000608482 349 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AL590282.1-201ENST00000610379 1136 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AP004607.9-201ENST00000618202 316 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms