Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HMGN1P9-201ENST00000515212 298 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 LSM3P2-201ENST00000551246 273 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 UBE2L4-201ENST00000587688 464 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL109918.2-201ENST00000605188 279 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 KPNA2P1-201ENST00000458289 1591 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 CUBNP3-201ENST00000457461 1784 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RNU6-1029P-201ENST00000384109 107 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 SNORA7B-201ENST00000384360 139 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RN7SKP235-201ENST00000410662 305 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RN7SKP89-201ENST00000410774 242 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RPS21P8-201ENST00000413365 247 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RSL24D1P6-201ENST00000426934 401 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC130472.1-201ENST00000427885 309 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC018804.1-201ENST00000430381 618 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 ARL5AP4-201ENST00000430731 512 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 GAPDHP32-201ENST00000433816 998 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC239860.1-201ENST00000444680 1270 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC020550.1-201ENST00000447385 163 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC239798.1-201ENST00000449024 1176 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RPL7P52-201ENST00000449200 742 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 CBX5P1-201ENST00000468470 561 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC127024.1-201ENST00000490847 418 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RN7SL445P-201ENST00000495609 293 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC008967.1-201ENST00000504843 163 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RNA5SP503-201ENST00000517047 117 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 OR52K3P-201ENST00000531655 943 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 OR8R1P-201ENST00000543943 764 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC092821.2-201ENST00000545710 2042 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 NUTF2P2-201ENST00000551207 384 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC092868.1-201ENST00000557949 802 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 MIR4703-201ENST00000577728 79 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC122710.3-201ENST00000606566 541 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC243312.2-201ENST00000623340 601 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC009948.5-201ENST00000624360 4406 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC092608.2-201ENST00000624427 218 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 WASF4P-201ENST00000444248 1494 ntBASIC6.97□□□□□ -1.29
USB1Q9BQ65 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms