Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL121895.2-201ENST00000619558 447 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 MT-RNR2-201ENST00000387347 1559 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 AC012321.1-201ENST00000561622 1588 ntBASIC5.33□□□□□ -1.56
VPS50Q96JG6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VPS50Q96JG6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS50Q96JG6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC068870.1-201ENST00000563737 2455 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL159987.1-201ENST00000347911 293 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 RNU6-236P-201ENST00000363886 106 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 RNA5SP131-201ENST00000365452 119 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 VDAC2P1-201ENST00000399358 958 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL391361.1-201ENST00000405580 489 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL136131.1-201ENST00000406079 803 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 RNA5SP487-201ENST00000410186 122 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 RNF10P1-201ENST00000418589 369 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 OR5M12P-201ENST00000423388 929 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 FMO7P-201ENST00000436045 768 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL163193.1-201ENST00000444895 788 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC079203.1-201ENST00000487972 404 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 RNU6-1004P-201ENST00000516584 111 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 RN7SKP99-201ENST00000517028 307 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 OR4A2P-201ENST00000527276 913 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AP002373.2-201ENST00000541631 1060 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 MTND4P33-201ENST00000556706 766 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC096996.1-201ENST00000563813 325 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 BNIP3P24-201ENST00000593398 557 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL035411.2-201ENST00000604022 421 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC025588.2-201ENST00000604851 466 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC023813.4-201ENST00000607580 580 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 FRG1HP-204ENST00000617940 757 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC010975.3-201ENST00000618727 978 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 LINC01808-202ENST00000641680 1116 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 UGT2B26P-201ENST00000508672 1613 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 OR55B1P-203ENST00000641518 2602 ntBASIC5.32□□□□□ -1.56
VPS50Q96JG6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS50Q96JG6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS50Q96JG6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VPS50Q96JG6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS50Q96JG6 AC079097.1-201ENST00000512187 1399 ntBASIC5.31□□□□□ -1.56
VPS50Q96JG6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms