Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AL121839.2-201ENST00000565058 6943 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 TTC39DP-201ENST00000416781 1688 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 AL603750.1-201ENST00000624216 1717 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.86□□□□□ -1.47
HPS3Q969F9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AC111188.2-201ENST00000529697 1387 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 RNU6-1339P-201ENST00000363574 91 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 RNU1-146P-201ENST00000364015 165 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 MIR513B-201ENST00000385136 84 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HPS3Q969F9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 RN7SKP59-201ENST00000410520 314 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 RPL12P9-201ENST00000412942 488 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 BMS1P13-201ENST00000417301 885 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AL133325.1-201ENST00000421090 382 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 CDY14P-201ENST00000431260 1014 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.86□□□□□ -1.47
HPS3Q969F9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AC084290.1-201ENST00000434995 374 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 CDY12P-201ENST00000440679 1015 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 EEF1A1P39-201ENST00000440791 250 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 CDY13P-201ENST00000445813 1015 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC099063.2-201ENST00000446360 662 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 CDY23P-201ENST00000451661 1014 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 CBX1P2-201ENST00000453841 458 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 NAP1L1P3-201ENST00000462291 880 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC093890.1-201ENST00000502554 540 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC091860.1-201ENST00000505723 432 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 ATP5LP3-201ENST00000514223 304 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.86□□□□□ -1.47
HPS3Q969F9 DUXAP5-201ENST00000529668 529 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 EIF4A2P5-201ENST00000529914 499 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC027369.5-201ENST00000533838 755 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC023538.1-201ENST00000534576 736 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.86□□□□□ -1.47
HPS3Q969F9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AC127381.1-201ENST00000555979 939 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 AP001542.2-201ENST00000593141 364 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.86□□□□□ -1.47
HPS3Q969F9 EIF1P6-201ENST00000600054 334 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 Z99289.3-201ENST00000605586 594 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AL138478.1-201ENST00000612252 832 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 AL355493.4-201ENST00000618530 292 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 Z99129.2-201ENST00000619967 314 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AP002782.1-201ENST00000623107 614 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 AC017104.5-201ENST00000637647 639 ntBASIC5.86□□□□□ -1.47
HPS3Q969F9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HPS3Q969F9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HPS3Q969F9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 OR55B1P-203ENST00000641518 2602 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 MIR105-1-201ENST00000385222 81 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 HSPA8P15-201ENST00000401676 786 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC005005.2-201ENST00000420779 380 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 RPL7L1P9-201ENST00000431298 745 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 CFL1P1-202ENST00000432948 411 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.85□□□□□ -1.47
HPS3Q969F9 TRBV8-2-201ENST00000475637 270 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC004815.1-201ENST00000484185 331 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 RN7SL814P-201ENST00000487715 300 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms