Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 AC108467.2-201ENST00000617640 1597 ntBASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.63□□□□□ -1.83
TTC9CQ8N5M4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 EOGT-210ENST00000615922 1931 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 KARSP3-201ENST00000571212 1504 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 MIR550A3-201ENST00000390735 95 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC006455.6-201ENST00000426192 893 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 RPL21P91-201ENST00000429231 479 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC104306.1-201ENST00000449702 371 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 RPL32P9-201ENST00000487963 407 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 OR51K1P-201ENST00000510214 950 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC007016.1-201ENST00000512110 244 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 OR5D15P-201ENST00000531671 942 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 CYCSP28-201ENST00000534284 321 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 RPL21P7-201ENST00000557463 483 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 ATP5J2P6-201ENST00000565203 266 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC007066.2-202ENST00000566531 914 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 ADAD1P2-201ENST00000588476 646 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AP002884.5-201ENST00000595053 1132 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 BNIP3P32-201ENST00000600015 554 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC023762.1-201ENST00000603280 584 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.62□□□□□ -1.83
TTC9CQ8N5M4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 A2MP1-204ENST00000566278 4130 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AP001002.1-201ENST00000625148 1513 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AL590240.1-201ENST00000334118 313 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 RNU1-108P-201ENST00000362556 161 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 RNA5SP513-201ENST00000364648 118 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 HDGFP1-201ENST00000405943 252 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 FCF1P5-201ENST00000406490 482 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 PTP4A1P1-201ENST00000420539 515 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 RPL23AP25-201ENST00000430973 463 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 APOOP2-201ENST00000461561 539 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC006967.1-201ENST00000467608 589 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 RN7SL809P-201ENST00000482040 297 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 RNA5SP446-201ENST00000515955 82 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC008147.3-201ENST00000548666 354 ntBASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.61□□□□□ -1.83
TTC9CQ8N5M4 MIR4436B2-201ENST00000581415 91 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms