Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP4Q8N3C7 AC092747.4-201ENST00000620519 1861 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL034370.1-201ENST00000397254 1590 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 MFSD8-213ENST00000641134 1327 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC132825.1-201ENST00000463573 2247 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC017079.1-201ENST00000333650 415 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP90-201ENST00000364801 99 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RNU1-74P-201ENST00000384108 171 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 OR8V1P-201ENST00000395193 873 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL603865.2-201ENST00000401679 213 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP178-201ENST00000410380 128 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RPL26P37-201ENST00000411983 438 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 XKRYP4-201ENST00000414395 483 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL365338.1-201ENST00000422282 858 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC006065.1-201ENST00000422539 802 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RPL7P34-201ENST00000433316 712 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL161722.2-201ENST00000434731 981 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RPS11P7-201ENST00000442125 465 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 XKRYP5-201ENST00000449659 483 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL133445.1-201ENST00000467051 452 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RN7SL717P-201ENST00000478343 297 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 RPL7P6-201ENST00000480903 738 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC147055.3-201ENST00000510547 851 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC138938.1-201ENST00000515431 782 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 DUX4L52-201ENST00000549363 777 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 MTCYBP27-201ENST00000555160 670 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 ZNF971P-201ENST00000562068 1249 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC009097.3-201ENST00000563557 1018 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC013444.2-201ENST00000603317 787 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 SUMO2P14-201ENST00000604488 293 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC118658.2-201ENST00000618697 459 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC022079.2-201ENST00000619739 566 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC074101.1-201ENST00000637861 241 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AC007382.1-201ENST00000624376 2618 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 CDC27P2-201ENST00000425026 1922 ntBASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP4Q8N3C7 LINC01109-201ENST00000603837 3081 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 HSPD1P11-201ENST00000508643 1702 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 U3.3-201ENST00000362986 216 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 RNA5SP242-201ENST00000364171 118 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 RN7SKP15-201ENST00000364742 309 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 RNU6-31P-201ENST00000384388 108 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 SNORA17A-201ENST00000391185 133 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 HMGB1P10-201ENST00000395823 563 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC013442.1-201ENST00000397347 228 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AL034403.1-201ENST00000399414 885 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 AC009804.1-201ENST00000400949 179 ntBASIC4.78□□□□□ -1.64
CLIP4Q8N3C7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms