Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 MED6P1-201ENST00000439659 713 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AL354714.3-201ENST00000447284 493 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 TCEA1P1-201ENST00000449716 880 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 IGHV5-78-201ENST00000450948 295 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 OFD1P3Y-201ENST00000453312 783 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 RPS3AP41-201ENST00000462701 778 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC083982.1-201ENST00000485679 344 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 OR5D15P-201ENST00000531671 942 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC079610.2-201ENST00000604818 690 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC099785.1-201ENST00000605697 437 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC116651.1-201ENST00000609724 556 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC068787.1-201ENST00000623908 691 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 AC083865.1-201ENST00000636634 831 ntBASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SCN4BQ8IWT1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC027228.2-201ENST00000567141 2154 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 RNU4-31P-201ENST00000384211 141 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 RNU6-532P-201ENST00000384318 107 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MIR585-201ENST00000384887 94 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AP002530.1-201ENST00000405705 684 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 COX6B1P1-201ENST00000415962 213 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MTCO2P23-201ENST00000425216 680 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 USP12PY-201ENST00000427677 1064 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ARF4P4-201ENST00000439608 520 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 RRM2P4-201ENST00000441721 562 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 RPS3AP53-201ENST00000454716 778 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC097486.1-201ENST00000515331 210 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MTND2P32-201ENST00000521584 1038 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AP003717.3-201ENST00000544832 1180 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MTND1P24-201ENST00000552175 861 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL049830.4-201ENST00000555149 351 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL606834.3-201ENST00000602615 496 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC087783.2-201ENST00000605070 562 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AP004607.9-201ENST00000618202 316 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AL669942.2-201ENST00000620352 697 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AP000770.2-201ENST00000623694 100 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC063976.2-201ENST00000425667 3556 ntBASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4BQ8IWT1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4BQ8IWT1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms