Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDH1Q08174 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDH1Q08174 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDH1Q08174 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
PCDH1Q08174 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL512353.3-201ENST00000417517 1326 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 Y_RNA.1-201ENST00000352915 104 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RNA5SP350-201ENST00000363298 111 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 SNORA38B-201ENST00000363524 131 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RNU6-1085P-201ENST00000363576 107 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDH1Q08174 RNU6-483P-201ENST00000384088 108 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RNU6-809P-201ENST00000384461 107 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 VN1R8P-201ENST00000407739 893 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL929472.1-201ENST00000417484 429 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 ZNF90P2-204ENST00000419323 1075 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AF228730.4-201ENST00000421457 183 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 SPATA20P1-201ENST00000423089 438 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 NPM1P22-201ENST00000427761 952 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC109583.1-201ENST00000432156 268 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RPL3P11-201ENST00000434028 1146 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC009961.2-201ENST00000435771 251 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 MGAT2P1-201ENST00000449718 797 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 TVP23CP1-201ENST00000450317 639 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC009244.1-201ENST00000450566 258 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 RAD23BP3-201ENST00000454157 1152 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 RN7SKP196-201ENST00000516267 345 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 Y_RNA.675-201ENST00000516389 149 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 Y_RNA.693-201ENST00000516641 110 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDH1Q08174 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC125611.2-201ENST00000551907 647 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 NMNAT1P1-201ENST00000554095 876 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 RPL21P5-201ENST00000554662 472 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AL359212.1-201ENST00000556608 614 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDH1Q08174 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 MIR4312-201ENST00000579909 76 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 MIR3682-201ENST00000581338 84 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AC005498.1-201ENST00000592125 465 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC018695.5-201ENST00000605872 315 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 AL356274.1-201ENST00000617064 410 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 AC005618.4-201ENST00000625053 554 ntBASIC6.37□□□□□ -1.39
PCDH1Q08174 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDH1Q08174 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PCDH1Q08174 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDH1Q08174 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC110597.1-201ENST00000562669 3176 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 AP003486.1-201ENST00000525716 3994 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms