Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC092162.3-201ENST00000624511 1624 ntBASIC3.65□□□□□ -1.83
SSBP1Q04837 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP1Q04837 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP1Q04837 LINC02471-203ENST00000641941 4752 ntBASIC3.65□□□□□ -1.83
SSBP1Q04837 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP1Q04837 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
SSBP1Q04837 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP1Q04837 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP1Q04837 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.65□□□□□ -1.83
SSBP1Q04837 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP1Q04837 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AC018529.3-201ENST00000624212 2254 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AC010928.1-201ENST00000592477 1447 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 NACAP7-201ENST00000407371 609 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP1Q04837 CNOT7P2-201ENST00000441051 832 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP1Q04837 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP1Q04837 YRDCP3-201ENST00000456507 480 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AC105918.1-201ENST00000474399 838 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 BX284632.1-201ENST00000478218 541 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 ATP1B1P1-201ENST00000509767 915 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 MTATP6P1-201ENST00000514057 681 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 IGLVIV-53-201ENST00000520107 367 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 SOX5P1-201ENST00000524155 1127 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AP000827.1-201ENST00000527814 258 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AP001880.2-201ENST00000538233 448 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AC008033.2-201ENST00000542626 177 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AC063950.1-201ENST00000552036 308 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP1Q04837 AL512782.1-201ENST00000603093 364 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 MRPS35P3-201ENST00000603189 709 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AC079587.1-201ENST00000603846 277 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP1Q04837 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP1Q04837 PABPC1P6-201ENST00000445594 1829 ntBASIC3.64□□□□□ -1.83
SSBP1Q04837 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP1Q04837 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP1Q04837 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSBP1Q04837 MIR323A-201ENST00000362199 86 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 MIR708-201ENST00000390708 88 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 CXADRP1-201ENST00000398098 1095 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 RNA5SP113-201ENST00000410486 84 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 RN7SKP100-201ENST00000411258 284 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 AP001324.1-201ENST00000428553 399 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 CEACAMP1-201ENST00000434624 1035 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 AC005154.2-201ENST00000438110 379 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 TRY2P-201ENST00000448860 689 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.63□□□□□ -1.83
SSBP1Q04837 RPL23AP72-201ENST00000492447 435 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP1Q04837 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP1Q04837 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP1Q04837 MIR2114-201ENST00000516645 80 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP1Q04837 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP1Q04837 AC104662.1-201ENST00000604448 511 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 AL021997.2-201ENST00000615674 271 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 CXADRP3-202ENST00000617265 1100 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP1Q04837 OR2L1P-202ENST00000641567 1023 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP1Q04837 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP1Q04837 ICE2P1-201ENST00000512800 1849 ntBASIC3.63□□□□□ -1.83
SSBP1Q04837 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SSBP1Q04837 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 VPS35P1-201ENST00000563400 1518 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 RNA5SP242-201ENST00000364171 118 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AP000534.2-201ENST00000412729 568 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AMD1P2-201ENST00000412936 992 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSBP1Q04837 MTCO1P54-201ENST00000430139 712 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AC087650.1-201ENST00000431445 468 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 AC096638.2-201ENST00000434965 711 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 HMGB3P9-201ENST00000441799 583 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 RN7SKP276-201ENST00000516242 268 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.62□□□□□ -1.83
SSBP1Q04837 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms