Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CFL1P1-202ENST00000432948 411 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.74□□□□□ -1.65
CBX1P83916 RPL10P17-201ENST00000453852 316 ntBASIC4.74□□□□□ -1.65
CBX1P83916 HIGD1AP8-201ENST00000453927 274 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.74□□□□□ -1.65
CBX1P83916 RNA5SP143-201ENST00000516936 115 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.74□□□□□ -1.65
CBX1P83916 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CBX1P83916 TRAV11-201ENST00000539512 339 ntBASIC4.74□□□□□ -1.65
CBX1P83916 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CBX1P83916 BLZF2P-201ENST00000553776 1130 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.74□□□□□ -1.65
CBX1P83916 RPL10P14-201ENST00000565265 298 ntBASIC4.74□□□□□ -1.65
CBX1P83916 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.74□□□□□ -1.65
CBX1P83916 BMS1P7-201ENST00000602440 1052 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AC103792.1-201ENST00000603591 919 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AC000068.2-201ENST00000608816 460 ntBASIC4.74□□□□□ -1.65
CBX1P83916 RN7SL722P-201ENST00000617780 284 ntBASIC4.74□□□□□ -1.65
CBX1P83916 RN7SL565P-201ENST00000618246 284 ntBASIC4.74□□□□□ -1.65
CBX1P83916 MIR6861-201ENST00000618657 64 ntBASIC4.74□□□□□ -1.65
CBX1P83916 AP002967.1-201ENST00000624203 539 ntBASIC4.74□□□□□ -1.65
CBX1P83916 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.74□□□□□ -1.65
CBX1P83916 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.74□□□□□ -1.65
CBX1P83916 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.74□□□□□ -1.65
CBX1P83916 MTND4P10-201ENST00000446199 1363 ntBASIC4.74□□□□□ -1.65
CBX1P83916 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CBX1P83916 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
CBX1P83916 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 RNA5SP428-201ENST00000365129 132 ntBASIC4.73□□□□□ -1.65
CBX1P83916 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 SNORA11.5-201ENST00000408163 128 ntBASIC4.73□□□□□ -1.65
CBX1P83916 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CBX1P83916 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.73□□□□□ -1.65
CBX1P83916 EEF1B2P8-201ENST00000414101 671 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 AC066692.1-201ENST00000421721 457 ntBASIC4.73□□□□□ -1.65
CBX1P83916 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 CDY14P-201ENST00000431260 1014 ntBASIC4.73□□□□□ -1.65
CBX1P83916 RPL23AP89-201ENST00000439324 255 ntBASIC4.73□□□□□ -1.65
CBX1P83916 CDY12P-201ENST00000440679 1015 ntBASIC4.73□□□□□ -1.65
CBX1P83916 CDY13P-201ENST00000445813 1015 ntBASIC4.73□□□□□ -1.65
CBX1P83916 CASP3P1-201ENST00000446037 609 ntBASIC4.73□□□□□ -1.65
CBX1P83916 IGHV5-78-201ENST00000450948 295 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AC243772.1-201ENST00000451620 410 ntBASIC4.73□□□□□ -1.65
CBX1P83916 CDY23P-201ENST00000451661 1014 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.73□□□□□ -1.65
CBX1P83916 AC011476.1-201ENST00000466725 307 ntBASIC4.73□□□□□ -1.65
CBX1P83916 RPSAP39-201ENST00000467439 883 ntBASIC4.73□□□□□ -1.65
CBX1P83916 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AC104629.2-201ENST00000468627 598 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.73□□□□□ -1.65
CBX1P83916 AC017037.1-201ENST00000508460 471 ntBASIC4.73□□□□□ -1.65
CBX1P83916 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 HMGB1P40-201ENST00000525121 540 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 AC084373.1-201ENST00000603311 235 ntBASIC4.73□□□□□ -1.65
CBX1P83916 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.73□□□□□ -1.65
CBX1P83916 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AC007683.2-201ENST00000624681 714 ntBASIC4.73□□□□□ -1.65
CBX1P83916 OR8A1-204ENST00000642111 1145 ntBASIC4.73□□□□□ -1.65
CBX1P83916 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CBX1P83916 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.73□□□□□ -1.65
CBX1P83916 AC106871.1-201ENST00000568324 3102 ntBASIC4.73□□□□□ -1.65
CBX1P83916 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CBX1P83916 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.72□□□□□ -1.65
CBX1P83916 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
CBX1P83916 Z82217.1-201ENST00000625157 8149 ntBASIC4.72□□□□□ -1.65
CBX1P83916 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CBX1P83916 AC025031.4-201ENST00000621248 3271 ntBASIC4.72□□□□□ -1.65
CBX1P83916 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CBX1P83916 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CBX1P83916 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CBX1P83916 OR52B3P-201ENST00000314715 928 ntBASIC4.72□□□□□ -1.65
CBX1P83916 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
CBX1P83916 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CBX1P83916 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CBX1P83916 ST13P16-201ENST00000401760 781 ntBASIC4.72□□□□□ -1.65
CBX1P83916 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.72□□□□□ -1.65
CBX1P83916 GABARAPL3-201ENST00000412799 354 ntBASIC4.72□□□□□ -1.65
CBX1P83916 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.72□□□□□ -1.65
CBX1P83916 RPL23AP25-201ENST00000430973 463 ntBASIC4.72□□□□□ -1.65
CBX1P83916 CYCSP11-201ENST00000436426 315 ntBASIC4.72□□□□□ -1.65
CBX1P83916 PA2G4P6-201ENST00000438325 1197 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms