Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC122134.1-201ENST00000565664 1104 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 MIR4429-201ENST00000580105 73 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 SNORA74C-1-201ENST00000580726 201 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC090948.1-201ENST00000607464 549 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 BX005214.3-202ENST00000619809 325 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 U3.53-201ENST00000628922 216 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 AC107021.2-201ENST00000567714 2095 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN6P56747 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN6P56747 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN6P56747 AC097461.1-201ENST00000568928 2821 ntBASIC4.5□□□□□ -1.69
CLDN6P56747 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 AC000374.1-201ENST00000434698 1745 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AC233968.1-201ENST00000611212 1300 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 RNU1-64P-201ENST00000365443 163 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 OR13C3-201ENST00000374781 1108 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 SNORA70C-201ENST00000384538 135 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN6P56747 OR51A6P-201ENST00000418680 1004 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 RPL34P6-201ENST00000432390 345 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 GTF3AP5-201ENST00000442645 697 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN6P56747 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 AL359073.1-201ENST00000448036 403 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 RPL21P129-201ENST00000491732 478 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 RPL36AP41-201ENST00000493820 306 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AC010476.1-201ENST00000519111 851 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 MRPL49P2-201ENST00000521066 465 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN6P56747 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN6P56747 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN6P56747 AC022916.3-201ENST00000592961 742 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 SNORA35B-201ENST00000607417 129 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 OR7A19P-201ENST00000608051 733 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AC023043.4-201ENST00000612081 449 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 AL445567.2-201ENST00000618935 498 ntBASIC4.49□□□□□ -1.69
CLDN6P56747 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLDN6P56747 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN6P56747 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN6P56747 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN6P56747 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 AC019072.1-201ENST00000604535 1551 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 OR51B3P-201ENST00000412287 913 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 TMSB10P2-201ENST00000416049 131 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 GNG5P5-201ENST00000420444 220 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 RPS3AP54-201ENST00000435535 734 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN6P56747 AL157385.1-201ENST00000446973 268 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AL162591.2-201ENST00000449634 317 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 RN7SL303P-201ENST00000469773 251 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 RPL7P19-201ENST00000469948 618 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN6P56747 RN7SL604P-201ENST00000492589 296 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC020593.1-201ENST00000507399 299 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN6P56747 RNU6-513P-201ENST00000516104 104 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AC105031.1-201ENST00000518550 476 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN6P56747 MED28P5-201ENST00000528254 438 ntBASIC4.48□□□□□ -1.69
CLDN6P56747 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms