Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL356118.1-201ENST00000635272 1078 ntBASIC5.31□□□□□ -1.56
HDAC4P56524 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HDAC4P56524 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC4P56524 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC4P56524 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC4P56524 AC007382.1-201ENST00000624376 2618 ntBASIC5.31□□□□□ -1.56
HDAC4P56524 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC4P56524 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC4P56524 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC4P56524 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC4P56524 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC4P56524 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC4P56524 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC104118.1-201ENST00000607625 1589 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AL731532.2-201ENST00000623542 1953 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 RPL23P2-201ENST00000320371 421 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 RN7SKP224-201ENST00000364140 325 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 AL158050.1-201ENST00000416077 457 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 COX6CP13-201ENST00000428703 226 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 KNOP1P3-201ENST00000446933 426 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 RPL32P14-201ENST00000463196 378 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 RN7SL443P-201ENST00000464331 290 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC4P56524 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC097484.1-201ENST00000471148 389 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC006499.3-201ENST00000506077 748 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 HMGB1P19-201ENST00000517578 577 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC4P56524 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.3□□□□□ -1.56
HDAC4P56524 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 TAS2R6P-201ENST00000605022 826 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC097504.2-201ENST00000608088 454 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC112503.2-201ENST00000609005 552 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC016597.2-201ENST00000613256 341 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC005156.1-201ENST00000613371 573 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
HDAC4P56524 AL592182.3-201ENST00000642132 3304 ntBASIC5.3□□□□□ -1.56
HDAC4P56524 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC4P56524 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 AL034370.1-201ENST00000397254 1590 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 RN7SKP115-201ENST00000363177 317 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 RN7SKP113-201ENST00000363891 295 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 UBBP2-201ENST00000376781 231 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 MIR585-201ENST00000384887 94 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDAC4P56524 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.29□□□□□ -1.56
HDAC4P56524 MTND4P11-201ENST00000417020 1058 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC092017.2-201ENST00000427600 362 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC4P56524 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.29□□□□□ -1.56
HDAC4P56524 MTCYBP21-201ENST00000443300 1113 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AC073850.1-201ENST00000449243 255 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 NPM1P39-201ENST00000449818 867 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC005532.2-201ENST00000467154 373 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 RPS18P6-201ENST00000476880 458 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AC090114.3-201ENST00000479267 829 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 RN7SL441P-201ENST00000492388 296 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC4P56524 RNU6-1308P-201ENST00000516817 103 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.29□□□□□ -1.56
HDAC4P56524 AC138701.1-201ENST00000524329 714 ntBASIC5.29□□□□□ -1.56
HDAC4P56524 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms