Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL356274.1-201ENST00000617064 410 ntBASIC4.8□□□□□ -1.64
PDX1P52945 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.8□□□□□ -1.64
PDX1P52945 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.8□□□□□ -1.64
PDX1P52945 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
PDX1P52945 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PDX1P52945 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 AC004817.4-201ENST00000602396 3625 ntBASIC4.8□□□□□ -1.64
PDX1P52945 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PDX1P52945 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
PDX1P52945 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 AC020633.1-201ENST00000468439 2247 ntBASIC4.8□□□□□ -1.64
PDX1P52945 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDX1P52945 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 AC011755.1-201ENST00000623763 2049 ntBASIC4.79□□□□□ -1.64
PDX1P52945 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 GCNT6-201ENST00000379591 934 ntBASIC4.79□□□□□ -1.64
PDX1P52945 MIR137-201ENST00000385223 102 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AL035079.1-201ENST00000405210 287 ntBASIC4.79□□□□□ -1.64
PDX1P52945 GTF2IP5-201ENST00000414608 731 ntBASIC4.79□□□□□ -1.64
PDX1P52945 COX6CP17-201ENST00000421389 185 ntBASIC4.79□□□□□ -1.64
PDX1P52945 DNAJC19P7-201ENST00000428811 344 ntBASIC4.79□□□□□ -1.64
PDX1P52945 CYCSP42-201ENST00000450823 238 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.79□□□□□ -1.64
PDX1P52945 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 HPRT1P1-201ENST00000509498 657 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.79□□□□□ -1.64
PDX1P52945 RNA5SP392-201ENST00000516905 112 ntBASIC4.79□□□□□ -1.64
PDX1P52945 FTH1P11-201ENST00000517577 551 ntBASIC4.79□□□□□ -1.64
PDX1P52945 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 AC109635.6-201ENST00000525487 1113 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AP003102.1-201ENST00000525638 661 ntBASIC4.79□□□□□ -1.64
PDX1P52945 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 MTND5P21-201ENST00000531961 522 ntBASIC4.79□□□□□ -1.64
PDX1P52945 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 AP001880.2-201ENST00000538233 448 ntBASIC4.79□□□□□ -1.64
PDX1P52945 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 AC093510.2-201ENST00000562820 896 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.79□□□□□ -1.64
PDX1P52945 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 BNIP3P39-201ENST00000601077 554 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 AC108359.1-201ENST00000616451 1211 ntBASIC4.79□□□□□ -1.64
PDX1P52945 MIR6758-201ENST00000620653 63 ntBASIC4.79□□□□□ -1.64
PDX1P52945 AC012414.7-202ENST00000622705 1090 ntBASIC4.79□□□□□ -1.64
PDX1P52945 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
PDX1P52945 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDX1P52945 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.79□□□□□ -1.64
PDX1P52945 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDX1P52945 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PDX1P52945 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDX1P52945 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
PDX1P52945 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
PDX1P52945 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
PDX1P52945 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDX1P52945 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDX1P52945 ATP5HP3-201ENST00000396994 486 ntBASIC4.78□□□□□ -1.64
PDX1P52945 TAF9BP2-201ENST00000400856 499 ntBASIC4.78□□□□□ -1.64
PDX1P52945 U3.32-201ENST00000408116 212 ntBASIC4.78□□□□□ -1.64
PDX1P52945 RNU4-27P-201ENST00000410889 139 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AL445213.1-201ENST00000412589 747 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.78□□□□□ -1.64
PDX1P52945 GNG5P5-201ENST00000420444 220 ntBASIC4.78□□□□□ -1.64
PDX1P52945 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.78□□□□□ -1.64
PDX1P52945 AC009238.2-201ENST00000431026 355 ntBASIC4.78□□□□□ -1.64
PDX1P52945 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.78□□□□□ -1.64
PDX1P52945 AURKAPS2-201ENST00000454983 333 ntBASIC4.78□□□□□ -1.64
PDX1P52945 PSMC1P13-201ENST00000458195 985 ntBASIC4.78□□□□□ -1.64
PDX1P52945 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.78□□□□□ -1.64
PDX1P52945 RN7SL385P-201ENST00000468873 276 ntBASIC4.78□□□□□ -1.64
PDX1P52945 CDH12P2-201ENST00000504393 298 ntBASIC4.78□□□□□ -1.64
PDX1P52945 AC093720.1-201ENST00000505681 714 ntBASIC4.78□□□□□ -1.64
PDX1P52945 ENPP7P11-201ENST00000505915 627 ntBASIC4.78□□□□□ -1.64
PDX1P52945 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms