Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF144AP50876 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF144AP50876 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF144AP50876 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF144AP50876 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF144AP50876 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
RNF144AP50876 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF144AP50876 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 OFD1P17-201ENST00000437639 3018 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 AC105074.1-201ENST00000623380 3095 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RNF144AP50876 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 Y_RNA.47-201ENST00000362697 108 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RNU6-1097P-201ENST00000363586 107 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RNA5SP396-201ENST00000364834 120 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RNU6-108P-201ENST00000365558 107 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 ARMCX7P-201ENST00000372828 562 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RNF144AP50876 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 RNU6-985P-201ENST00000410182 104 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RNU2-28P-201ENST00000410457 189 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RNU4-14P-201ENST00000410858 122 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC127526.1-201ENST00000417526 366 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC004692.1-201ENST00000455430 424 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RPS4XP10-201ENST00000465034 731 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RPL34P34-201ENST00000465389 354 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RN7SL91P-201ENST00000469313 291 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 RN7SL228P-201ENST00000470060 303 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC010587.1-201ENST00000505809 469 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 SAA3P-201ENST00000533267 365 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL845552.1-201ENST00000556820 323 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 AC243312.1-201ENST00000570582 275 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 MIR4685-201ENST00000578185 69 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 RPS28P1-201ENST00000604589 187 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AL008723.3-201ENST00000608926 449 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AC097381.3-201ENST00000608962 462 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AC005899.7-201ENST00000618199 588 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 AL450226.2-201ENST00000622913 439 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF144AP50876 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 AC007485.2-201ENST00000623493 1667 ntBASIC6.7□□□□□ -1.34
RNF144AP50876 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF144AP50876 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RNF144AP50876 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF144AP50876 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF144AP50876 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF144AP50876 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF144AP50876 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.69□□□□□ -1.34
RNF144AP50876 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF144AP50876 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF144AP50876 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF144AP50876 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF144AP50876 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF144AP50876 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF144AP50876 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
RNF144AP50876 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF144AP50876 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms